Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1656 ATGGGGGCGATGAGAGAGATGATATTCAGAATAGCAGTGATGCAGCCGATTCAGATAGACCCGGAAGCCATAAAGGCGCCGAAGCGGAGGAACGTGAAGATATCGAAGGACCCCCAGAGTGTGGCGGCGAGGCACCGCAGGGAGAGGATCAGCGAGAGGATTCGGATTTTGCAGAGATTGGTTCCTGGTGGGACCAAGATGGACACCGCCTCTATGCTCGACGAAGCCATTCATTACGTCAAGTTCTTGAAGAAGCAAGTCCAGACCCTCCACCAGGCTGGGGCTAATAGGGCCTTGGGCTTTGGGCTCCCCACTACTGCTGCTGCTGCTACTACTAATGTCAATTATTACTCTTGTTCCTCCATCAAAGATGCTGAGGCAAAAATGGCGGAAGAAACTTGTTTTTCTCGGGTAGAAGAAGCTTATCAAAGGGCCATGGAAGAACGCCTTAATCGAGTAGAAAGCTCAGTACTGAAATGCAAGGAATCTATTCAACATCTGGAGAGTTTACTGCATCGATTGACGCTATCTCAAGGTATGAACATCGAACTCCCACGCTTCGATGGCACTAATGCTGAGCACTGGATCTTCAAGATCCAGAACTTTTTTGAAATTTACAGCACTCCAGAGGATCAAAGGATGAAAATAGCATCGATCCACATGAGTGGGCCAGCCTGCTCCTGGTATATGTTGATCGTAAGGAACGATTACATTCGCTCATGGCAAGATTTTTTGGATGCTGTTACTTCGTTTTGGCTCGTCTCATCCGACACCACAGTGGAAGAGTATGAAGCCAAATTTGAAGAGCTTTATAGTAGAGTCACACTCCCTGGCTTATCAGAACCGTGGCTGGTTGGCTCCTTCATTGCTGGGCTTCAAGACTCAATCAAATATGAACTATTCGTCGCACAGCCCAATTCCTATCTTGAAGCGGTTTCGTTAGCTAAATTGCATGAAAGAAAACAGCAAAAGACACAACAACTCTTTGGAACTTGA 996 0.4709 MGAMREMIFRIAVMQPIQIDPEAIKAPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLHQAGANRALGFGLPTTAAAATTNVNYYSCSSIKDAEAKMAEETCFSRVEEAYQRAMEERLNRVESSVLKCKESIQHLESLLHRLTLSQGMNIELPRFDGTNAEHWIFKIQNFFEIYSTPEDQRMKIASIHMSGPACSWYMLIVRNDYIRSWQDFLDAVTSFWLVSSDTTVEEYEAKFEELYSRVTLPGLSEPWLVGSFIAGLQDSIKYELFVAQPNSYLEAVSLAKLHERKQQKTQQLFGT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1656 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 34 83 IPR011598 GO:0046983
Sto11g1656 331 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 120 IPR045843 GO:0003700|GO:0006355
Sto11g1656 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 92 IPR036638 GO:0046983
Sto11g1656 331 SMART finulus 40 89 IPR011598 GO:0046983
Sto11g1656 331 Pfam Helix-loop-helix DNA-binding domain 44 83 IPR011598 GO:0046983
Sto11g1656 331 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 1 120 - -
Sto11g1656 331 Gene3D - 33 99 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1656 Sto-Chr11 15486194 15489918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1656 1 90 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 93.333 1.49e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto11g1656 HLH 2.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1656 - - gmx:100812308 166.007