Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1623 ATGTCATCATCGAGTTCTCCGTGCGCGGCGTGCAAGTTTCTAAGGCGTAAATGCGTAGCAGACTGCATATTCGCACCGCACTTCCCACCCAAAGACACTGAAAGGTTCACAACCGTCCACAAGGTGTTCGGCGCAAGCCATCTGACTAGAATTCTGAGCAACCTCCAATTGTCGGACCGCGACCTGGCCGTCAAGTCTCTGGTCTACCAAGCCGAGGCTCGGATCCAGGACCCTGTGAGTGAGCTCTCCACTGTGTTGGGACCTCAAATTCtgcaatccaagcctattcgcGTACCCCGTGATGGAATGTTCGAGAAGGAGTATCCTGAATTTAACATGTCGACGcagccgccgccgccgccgtccaCGACGAGGATGGCGGCCAAACCGCCACTTCCGCCGCGTGGGTTGGTGATTCGTGAACCTCAGCCGGAGCAGCACCATCAACAATCGAATGATCAGCGGCAGATACCTTATTACGCACCTGATCAGGCGCCGCTGCACCTTCATAATTTGCAGGAGCAGCAGTTAATGGATGCGCAGCAATTGGCGGCGGCTGTAGAGGCTGAGCAATTGGAGATGGCTATGAAGGAGCAGCAATGGGAGGCGGCGATGGAGCGTGATGAAGAACTGCGGAAGCTGCTGCAGAATGAGGAGCAGAGGGAGAAGGAGCAGCAAGAGTTTTTTTGGCTTAATAATGGCGGGGGTTTTGAGACGAATTCAATAATTCCCAAGAGTAGATTTAATCAGGCGGATGAGAATCCTTTCGATCAGATGCAACTACAACAAGGGGAGAATCAGAACCAGATGCTACTACAGGAAGGGGAACATTATAGTCACCAGAACCATGAGCAACACCAAATGCAACTGCAACAAGGGGAACAGGAACACTATAACCACCAGATGCAAGTACAACAAGAGGATCATTATAATCACCAGATGCTACAGCTACTACAGGATGGGGAACATTATAGTTACCAGAACCATGAGCAGCACCAAATACAACTGCAACAAGGGAATCTCTATAACCACCAGAACCATGAGCACCACCAGATGCAATTACAACAAGGGGAACATTATAATGATCTCCTGAACCATGAGCACCATCAGATGCAATTACATCAAAGGGAACATTATAACCACCAGAACTATGAGCACCACCAATTGCAACTGCAGCAAGAGGAACATGATAACCATCAACACCACCAGATGCAAATTCAGCAAGAGCAACATCATAACCATCAGCACCACCAGATGCAACTACAGCAAAGGGAACATCATACCCATCCGCACCAGCAACTTCACCAGATGCAAATATCCCAACAACAGCTGCAAGAGCTGCAACACTGGCAGAAGCTGCAAGAGCTGCAAAACTACAACAGCTAA 1386 0.4762 MSSSSSPCAACKFLRRKCVADCIFAPHFPPKDTERFTTVHKVFGASHLTRILSNLQLSDRDLAVKSLVYQAEARIQDPVSELSTVLGPQILQSKPIRVPRDGMFEKEYPEFNMSTQPPPPPSTTRMAAKPPLPPRGLVIREPQPEQHHQQSNDQRQIPYYAPDQAPLHLHNLQEQQLMDAQQLAAAVEAEQLEMAMKEQQWEAAMERDEELRKLLQNEEQREKEQQEFFWLNNGGGFETNSIIPKSRFNQADENPFDQMQLQQGENQNQMLLQEGEHYSHQNHEQHQMQLQQGEQEHYNHQMQVQQEDHYNHQMLQLLQDGEHYSYQNHEQHQIQLQQGNLYNHQNHEHHQMQLQQGEHYNDLLNHEHHQMQLHQREHYNHQNYEHHQLQLQQEEHDNHQHHQMQIQQEQHHNHQHHQMQLQQREHHTHPHQQLHQMQISQQQLQELQHWQKLQELQNYNS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1623 461 MobiDBLite consensus disorder prediction 393 432 - -
Sto11g1623 461 Pfam Lateral organ boundaries (LOB) domain 7 81 IPR004883 -
Sto11g1623 461 Coils Coil 170 227 - -
Sto11g1623 461 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Sto11g1623 461 MobiDBLite consensus disorder prediction 393 440 - -
Sto11g1623 461 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 80 - -
Sto11g1623 461 MobiDBLite consensus disorder prediction 113 128 - -
Sto11g1623 461 MobiDBLite consensus disorder prediction 111 153 - -
Sto11g1623 461 PANTHER LOB DOMAIN-CONTAINING PROTEIN-RELATED 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1623 Sto-Chr11 15204205 15205665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1623 1 79 AS2 family AT5G66870 60.759 6.48e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto11g1623 LOB 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1623 - - cqi:110682262 143.28