Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1610 ATGCCGTCAGACGCCGGCGATAACACTCCCCGACCTTCCAAACCCCAGCCTCCGCCTCCCGAACAAGAGCACCTCCCATGCCCTCGCTGCGACTCCACCAACACCAAGTTCTGTTACTACAACAACTACAACTTCTCCCAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACATCCCCGTCGGCGGCGGCAGTCGCAAGAACGCCAAACGCTCCCGCACCAccgcctcctcctcctcctccgccgCCGCCTCTCCCTCCTCCGTTAATGTCACGGCTGTTTCCTCTGCTTCTACTCATCATCATCAGGACCATCCCTTGCCTACGACCCCTGTTTTTGTACCCATCTCGGCTAACCAAGGGGGGTCCCTTCCCTTCGGAGGGGTTGATAGTGATCATGTAAAGTCCACTATGGGGATGTGCGGAAGCTTCACTTCATTGCTTAATAACACCGCCCAGGGGCCCGGGTTTTTGGCTCTGGGCGggtttgggcttgggcttgggcaCGGGTTTGAAGAGATGGGATTTGGTGGTGGAAGAGCGGGTTGGGCTTTTCCCGGGATGGTAGATGGGTCTAACATTGGAGGCGGAGTTGGAGGTGCTTCCGGTGTGGGGAATTCGTGGCAGTTAGAAAATGGCGACGGCGGGTTCGTTGGTGGTGGAGACTGCTTCTCTTGGCCGGGACTCGCGATTTCAACACCTGGAAATGTATCTGACATGGGTTATGAATTATGTTTGGCAAATGGCAATCTGCATTTGAGCTTATCCTTTGATTTAGagggaaaatga 816 0.5233 MPSDAGDNTPRPSKPQPPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTTASSSSSAAASPSSVNVTAVSSASTHHHQDHPLPTTPVFVPISANQGGSLPFGGVDSDHVKSTMGMCGSFTSLLNNTAQGPGFLALGGFGLGLGHGFEEMGFGGGRAGWAFPGMVDGSNIGGGVGGASGVGNSWQLENGDGGFVGGGDCFSWPGLAISTPGNVSDMGYELCLANGNLHLSLSFDLEGK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1610 271 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 245 IPR045174 GO:0003700|GO:0006355
Sto11g1610 271 MobiDBLite consensus disorder prediction 11 25 - -
Sto11g1610 271 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Sto11g1610 271 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 245 - -
Sto11g1610 271 MobiDBLite consensus disorder prediction 1 27 - -
Sto11g1610 271 MobiDBLite consensus disorder prediction 77 114 - -
Sto11g1610 271 MobiDBLite consensus disorder prediction 66 118 - -
Sto11g1610 271 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Sto11g1610 271 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1610 Sto-Chr11 15119574 15120657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1610 1 245 C2C2-Dof Transcription Factor Family AT3G50410 49.242 7.44e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto11g1610 zf-Dof 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1610 - - cam:101488684 242.662