LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto11g1607	ATGGAGGATTCCCTTCAATTTTtctcaacctccatcatcaCCATACTTGCCTTTCTAGTCTGCATCTTCATTTACTACATCATAATACCATTTACAAATGAAACCACCAAACCCTCTAATGCACCACCACAAGCAGGTGGGGCTTTGCCTATTATTGGCCATCTCCATCATTTCAGTAGTCATAAACTAGTCTTGCATAAAACCCTAGCTTCCATGGCTGACAAATATGGACCAGCTTTTACCATAAAGATGGGTTCAAATAAAGTCCTGATTTTAAGCAGCTGGGAAATGGCAAGAGAGTGTTTCACTGTACATGACAAAGTATTTTCCACCAGACCTGCTGTTACAGCTTCAAAACTACTAGGCTATGATTGTGCCATGTTTGGATTTGCACCTTATGGACCTTACTGGCGTGAGGTGAGGAAGATAGCAACAATTGAGCTTCTTTCAAACCATAGGCTTGAAAAACTAAAGCACATAAGAAAATCTGAGGTGGAGATTGCAGTAAAAGAGCTGTATGATTTATGGTCTAACCAAGGTTGTCCTGAAAATGGGGTTATGGTGGATATGAAGCAATGGTTTGGGAATTTGTGTTTTAATGTTGTGATGAGAATGGTGGCTGGTAAGAGATACTTTGGAGGAAGCTCTGAGGATGGTGAGGCAGAATACTTCCAGAAAGTGATTAGGGAGTTTATAGATTTATTTGCAGTGCCTGTGTTATCTGATGCTATCCCAATGCTTAGGTGGTGGGATTTAAATGGTGCTAAGAAGGAAATGAAGAAGACTGCTAAAAAATTGGACCAACTTGTGGGTGAGTGGTTGGAAGAACACAAACAGAGGAGACTTTTGGGTGAGCAAGCAAGGGAAGAACAAGACTTCATGGATGTGATGCTGAGGATCTTGCAGGAAGATCCAATTCCTAATTCTTTTGACACAGACACTATCATCAAGTCCACTAGCTTGAATCTGATAGCCGGAAGTGACTCTGTAATTGTTTCTATAACATGGGCCTTATGTCTGATACTTAACAATACACATGTTTTGAAGAAGGCTCAAGAAGAGCTAGACATCCAAATAGGGAGGGATAGACAAGTGCAAGAATCGGACATTAAGAATTTAGCCTATTTGCAAGCAATTGTGAAGGAATCCTTGCGTCTCTACCCTGCCAGTGGACTCATTAGTCTTCTTGCAGCCATAGAAGATTGCACATTTTCCACTGGTTTTCACATCCCAGAAGGCACACAGTTGATGATAAACATGTGGAAAATACACCGTGACCCGAATGTGTGGCCGGATCCTCATAGCTTCCGACCCGAGAGATTCTTAATCAGCCACAAGGATATTGATGTGAAGGGGAAAGACTATGAGCTTCTTCCATTTGGTTCAGGAAGAAGATCATGCCCTGGAATGTCACTAGCTCTTCAGATCATTCATCTTACGCTGGCTACATTGTTGCATAGTTTTGATATTTCTACTTTATCTAAAGAACCTGTGGACATGACTGAGATCACTGGTTTGACTATCATGAAGGCAACCCCACTTGAGGTCCTTCTTGTTCCACGCCTTAAATTCTAA	1575	0.4102	MEDSLQFFSTSIITILAFLVCIFIYYIIIPFTNETTKPSNAPPQAGGALPIIGHLHHFSSHKLVLHKTLASMADKYGPAFTIKMGSNKVLILSSWEMARECFTVHDKVFSTRPAVTASKLLGYDCAMFGFAPYGPYWREVRKIATIELLSNHRLEKLKHIRKSEVEIAVKELYDLWSNQGCPENGVMVDMKQWFGNLCFNVVMRMVAGKRYFGGSSEDGEAEYFQKVIREFIDLFAVPVLSDAIPMLRWWDLNGAKKEMKKTAKKLDQLVGEWLEEHKQRRLLGEQAREEQDFMDVMLRILQEDPIPNSFDTDTIIKSTSLNLIAGSDSVIVSITWALCLILNNTHVLKKAQEELDIQIGRDRQVQESDIKNLAYLQAIVKESLRLYPASGLISLLAAIEDCTFSTGFHIPEGTQLMINMWKIHRDPNVWPDPHSFRPERFLISHKDIDVKGKDYELLPFGSGRRSCPGMSLALQIIHLTLATLLHSFDISTLSKEPVDMTEITGLTIMKATPLEVLLVPRLKF	524

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto11g1607	524	Coils	Coil	252	272	-	-
	Sto11g1607	524	Gene3D	Cytochrome P450	36	523	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto11g1607	524	PANTHER	CYTOCHROME P450 82C3-RELATED	5	523	-	-
	Sto11g1607	524	PANTHER	CYTOCHROME P450 CYP82D47-LIKE	5	523	-	-
	Sto11g1607	524	Pfam	Cytochrome P450	43	514	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto11g1607	524	SUPERFAMILY	Cytochrome P450	48	521	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto11g1607	524	PRINTS	E-class P450 group I signature	73	92	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto11g1607	524	PRINTS	E-class P450 group I signature	97	118	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto11g1607	524	PRINTS	E-class P450 group I signature	197	215	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto11g1607	524	PRINTS	E-class P450 group I signature	334	360	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto11g1607	Sto-Chr11	15103878	15106023	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto11g1607	14	523	Cytochrome P450	AT4G31940	50.000	0.0	538

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto11g1607	-		-	qsu:112038068	680.633

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