Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1600 ATGTTTTACTACCGGAAAAACTTTGCTATTGTGCTCGCGCTCCTCTTGTTCTACTCAACAAGAGCAGAGAAGTCGACCTCCTCTACCTGTGACCGCAAGTGCGGAGGATATTCTGTGCCGTATCCTTTGGGGTTTTCTGCGAATTGCAATATCAAATTGAATTGTGGCAGCAAACAACAAATGGAAATTGGGAAATTTCAGGTCCAGAAAGTAACCTCTAGCAGTATCTTCATCGATCTTCCTGCCAAATGCAACCGGAGTGTGCAATCTATCCACTCCCTTTTCAGTAAAAACTTTGCTCCCACAAAGAACAATAGCCTTCTCGTGCAAAGTTGTTCATCTGCGGTTGGCGGCTGCGTTATACCTTTTACCAGCTTAATGGGCCATCAATGGAAGTTGGACGGTTGCGATAAAAATAGTGAGAATATCAGTTGCTTCACGCAGCAGCTAACGAAGAACGATTTAGATGTTCTGACATACGATGATGTGGAAGGAACTAAGTGCAAGTATTTGTTCTCAGCGATTGCCGTTGAGCAGGGAAATGACCCTGCGATATCGCTCCAGCTTCAGGTGCTTCAGTTGGGGTGGTGGCTTGAAGGGTCATGCCAATGCTCTAACAATGCAAACTGTAGCATTGTCCATTTCGCTGAGGGGAAGAAAGGGTACCGATGCCAGTGTGCTGAAGGATACCAAGGAGATGGATTCAAGAACGGCACTGGTTGCCGGAGAGTTAGTCATTGCAGAGCTGCAACACTAATGTCTGGCGGATGTGGAAAAGCAGCTAAAATCGGTGTTCTTGCTGGAGGGATCATTGCTGTAGCTGTCTTCATAGCTGCTGTGTGTCTCCCATGTTACTTTGCTCGGCGCCGTTATACTGTTCTGAGAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGCAACTCTAGTGTTCCTTTCTATCCGtacaaagaaatagaaaaagccACTAATTTTTTCTCTGAGAAGCAGAGGCTGGGAACTGGGGCTTTTGGTACAGTGTATGCCGGAAAACTACACGATCATGAATGGGTTGCAATAAAAAAGATCAAGTATAGAGATACCAACAGCGTCGACCAAGTTATGAATGAGATCAAGCTTCTTTCTTCTGTGAGTCACCCTAACTTGGTTCGCCTATTGGGTTGCTGCATAGAAGGGGGCGAGCAGATACTTGTTTATGAGTTTATGCCCAATGGAACACTATCTCAACATTTACAAAGAGAGAGGGGTGCAGGACTTCCATGGACAATACGACTCACCATTGCCACTGAAACCGCTAATGCTATAGCTTATCTCCATTCTGCCATTGATCCACCAATTTATCACAGAGACATAAAATCCAGTAATATACTCTTGGATTACCACTTTAAATCAAAAGTAGCCGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACCGCTCCACAGGGGACACCAGGCTACGTTGACCCTCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCCTGAAAGTGGTTGATTTTGCTCGTCCTCATAGTGACGTTAATTTGGCTGCACTTGCTGTTGACAGGATTAGAAGGGATTGTGTGGATGAGATCGTAGATCCTTTCCTGGAGCCACACAGGGATGCATGGACACTTTACTCTGTTCACAAGGTGGCTGAGCTTGCCTTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATAGAAGTAGCAGAGGAGCTAGAAAGCATAAGACGCAGTGCATGGACAACAATGGAGGAAACTATATGCATGGCATCATCAGTTGGTTCCTCTTGTTCATCATTTGGTCGTATTGGAAGTGATAAGTCATGTGGTCGTATGAATTTTAAGAAAGCAGCACGAGGGAGTGAGAGATTAGTTGTAGTTGAACAGAGGATGGATAGTTTTCAGCATTCTGTGGGAGAGGTGAAAGATAGCTCCCCTGTATCAGTGCATGATCCTTGGTTAAGTGGACAAAGCTCTCCCTCAACAAACAGCTTGTTGGGAAACGTAGTTCACTGA 2100 0.4433 MFYYRKNFAIVLALLLFYSTRAEKSTSSTCDRKCGGYSVPYPLGFSANCNIKLNCGSKQQMEIGKFQVQKVTSSSIFIDLPAKCNRSVQSIHSLFSKNFAPTKNNSLLVQSCSSAVGGCVIPFTSLMGHQWKLDGCDKNSENISCFTQQLTKNDLDVLTYDDVEGTKCKYLFSAIAVEQGNDPAISLQLQVLQLGWWLEGSCQCSNNANCSIVHFAEGKKGYRCQCAEGYQGDGFKNGTGCRRVSHCRAATLMSGGCGKAAKIGVLAGGIIAVAVFIAAVCLPCYFARRRYTVLRKQMTVKRLLREAAGNSSVPFYPYKEIEKATNFFSEKQRLGTGAFGTVYAGKLHDHEWVAIKKIKYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRERGAGLPWTIRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYHFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPHSDVNLAALAVDRIRRDCVDEIVDPFLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMIEVAEELESIRRSAWTTMEETICMASSVGSSCSSFGRIGSDKSCGRMNFKKAARGSERLVVVEQRMDSFQHSVGEVKDSSPVSVHDPWLSGQSSPSTNSLLGNVVH 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1600 699 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Sto11g1600 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Sto11g1600 699 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 658 IPR045274 GO:0007166
Sto11g1600 699 SMART serkin_6 328 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1600 699 Gene3D Phosphorylase Kinase; domain 1 290 403 - -
Sto11g1600 699 MobiDBLite consensus disorder prediction 665 699 - -
Sto11g1600 699 Gene3D Transferase(Phosphotransferase) domain 1 404 621 - -
Sto11g1600 699 Pfam Protein kinase domain 328 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1600 699 SUPERFAMILY Protein kinase-like (PK-like) 309 601 IPR011009 -
Sto11g1600 699 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 18 658 - -
Sto11g1600 699 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1600 699 MobiDBLite consensus disorder prediction 678 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1600 Sto-Chr11 15039822 15043557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1600 8 697 Receptor kinase-like Gene Family AT2G23450 55.014 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto11g1600 PK_Tyr_Ser-Thr 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1600 - - gmx:100810861 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3750 6 42339079 42342157 Sto11g1600 11 15039822 15043557 CCT