Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1587 ATGAAGGAAAGGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTTTCCAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTCCGACTGTGGAAACCCATGGTAGAAGACATGTACCAACAAGAACTTAAAGAAGCAGAGAGTGCAGAAGAGAGAGAATTAGAAAGAAACCACAGCAGCAACAACAGCAACCTCGCACAAACTCCAaccactactactactacagCACCAACAACCTCAACAGCAACAGCAAcagcaccaccaccaccaccatcatcaacaacaacaacgacACCTTCCACACCCAAAAGATCCCATTTCAATCCTTCTGAAAGCGACCCTTCACAGCCCTTCTCGGAAACCCAACCCACCCTCATCTCCGCCGCCGctgctggtggtggtggttcTGAGGCGGCGCCACCATTGTCTCAGTGCTTCCAGGACTCGTCATCATCAGACCTGCTCTCACATCGACCCACCATGGGTACGGGCGAGGACACGTGTCGCCACGGCAGCTTGATTGCAGCGGATTACGGGACCGCCTCCGCTAGTGCTGACATCGGTTCCACTCTCATTAGGTTTGGGACCACCGCGGGTGACGTGTCACTCACCCTAGGGCTACGCCACGCTGGCAACATCCCAGACAAAGCTGCTCCTTTCTCCGTTAGAGACTTCGGACCCATTTAA 705 0.4709 MKERYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAESAEERELERNHSSNNSNLAQTPTTTTTTAPTTSTATATAPPPPPSSTTTTTPSTPKRSHFNPSESDPSQPFSETQPTLISAAAAGGGGSEAAPPLSQCFQDSSSSDLLSHRPTMGTGEDTCRHGSLIAADYGTASASADIGSTLIRFGTTAGDVSLTLGLRHAGNIPDKAAPFSVRDFGPI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1587 234 MobiDBLite consensus disorder prediction 48 64 - -
Sto11g1587 234 CDD homeodomain 2 40 IPR001356 GO:0003677
Sto11g1587 234 Gene3D - 1 44 - -
Sto11g1587 234 MobiDBLite consensus disorder prediction 148 164 - -
Sto11g1587 234 Pfam Homeobox KN domain 5 35 IPR008422 GO:0003677|GO:0006355
Sto11g1587 234 MobiDBLite consensus disorder prediction 65 88 - -
Sto11g1587 234 MobiDBLite consensus disorder prediction 103 132 - -
Sto11g1587 234 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 5 222 - -
Sto11g1587 234 Coils Coil 42 62 - -
Sto11g1587 234 ProSiteProfiles 'Homeobox' domain profile. 1 39 IPR001356 GO:0003677
Sto11g1587 234 MobiDBLite consensus disorder prediction 48 169 - -
Sto11g1587 234 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 5 222 - -
Sto11g1587 234 SUPERFAMILY Homeodomain-like 2 46 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1587 Sto-Chr11 14967280 14969672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1587 4 234 Homeobox Transcription Factor Family AT2G23760 44.397 6.75e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Sto11g1587 Homeobox_KN 5.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1587 - - qlo:115994757 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3773 6 42438300 42441227 Sto11g1587 11 14967280 14969672 CCT