LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto11g1586	ATGGGAATAGCAACGCCGGCGGCACGAGTTCCATCAATTGTCTGCCACTCCAATTATAGTTATTCTATGTCCCACGAttatcaccaccaccaccaacagcAAGGAGGTGGAGGAATCTTTCATTTCTCCAATGGCTTCGACAGATCCGGCGTGACAGCTCAGCAGATCCGGAGGGAGAAGGTGAGGGTGCAGGCAAACGGGGGGTTCGAGCCCCCACCCCCACCCCCACCCTTAGTGGGAATAGAAGAAGAACATTCTGGAAACCTTGCTCCCTATCATGAGAGCGCAGGTATGTTATCCGAGATGTTCAATTTCCCTCCCTCCGCCCCCGCCACCGCATCTCAATTATTGGCCCAACAaggcccaccaccaccacccaggCCGCCTATTGGGATGCCCAACGATTGGTACGGAAATCCCAAGAATCATCAACCTAATCAGATGTCTGCGGACTCAGCCGCTGCCATGCAGCTTTTTCTGATGAACCCACCACAGACCACTAGATCGCCTTCTCCCACGCCTAATTCTGCCACTCCAGGCCCAGGGGGTTTCGGTCAATTCACTTGGCTTCCTGATCACCAAGCATCACAGATTGGAGGCGTCGTGGAGGGTCAAGCCCTTAACTTATCATTATCCTCTTCCTTGGAAGCTGCCAAAGCCCAGGAGTTGAGGATGGGGGACACCAGCTTCTTGTATTACAACAATAACCATCAACCAGGTGCGGCAggcccttcttcttcttcttccacctctGCTCATCATTACCCCTACAAGACATTGACTTTCCAGGGCTCCGGGTCGGGTCAGAACCACCCCGCGGCTCATCTGGGGTTCGGGTCCCCCTCGTCGTCCTTGGGAGTGGTACATGTGCTGAGGAATTCCAAGTATGTGAGGCCTGCGCAAGAATTGCTCGAGGAATTCTGTAGTGTGGGGAGAGGGCAgttcaagaagaacaagttcACTCCCCAGAATTCTAACCCTAGTTCCAATATTCCTCCTCCCGccgcttcttcctcttccttcaaAGATCCTCTTCCTTTGTCTGCGGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAGCTCCTATCCATGCTTGACGAGGCATGTGGAGCGAAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACTCATTCGACGTGGTGATGGGGTTCGGGTCCGCGGTTCCGTACACGGCGCTAGCCCAGAAGGCAATGTCCCGTCACTTCCGGTGCCTGAAGGACGCGATAACGGCTCAGCTGAGGCAGAGTTGCGAGGTGCTGGGAGAGAAAGAGGGAGGAGGAGGGACGTCGTCGGGGCTAACGAAGGGGGAGACACCGAGGCTGAAGCTTCTAGAACAAAGCCTGAGGCAGCAACGAGCCTTCCATCAGATGGGGATGATGGAGCAAGAAGCGTGGCGTCCCCAGCGTGGCCTCCCCGAACGATCCGTCAACATTTTGCGCGCCTGGCTCTTCGAGCATTTCCTTCACCCGTACGGGACTCCCTCCCTTCTTTTCATTACTTTGGGATCtga	1542	0.5078	MGIATPAARVPSIVCHSNYSYSMSHDYHHHHQQQGGGGIFHFSNGFDRSGVTAQQIRREKVRVQANGGFEPPPPPPPLVGIEEEHSGNLAPYHESAGMLSEMFNFPPSAPATASQLLAQQGPPPPPRPPIGMPNDWYGNPKNHQPNQMSADSAAAMQLFLMNPPQTTRSPSPTPNSATPGPGGFGQFTWLPDHQASQIGGVVEGQALNLSLSSSLEAAKAQELRMGDTSFLYYNNNHQPGAAGPSSSSSTSAHHYPYKTLTFQGSGSGQNHPAAHLGFGSPSSSLGVVHVLRNSKYVRPAQELLEEFCSVGRGQFKKNKFTPQNSNPSSNIPPPAASSSSFKDPLPLSAADRIEHQRRKVKLLSMLDEACGAKIQPLLRANADGGELIRRGDGVRVRGSVHGASPEGNVPSLPVPEGRDNGSAEAELRGAGRERGRRRDVVGANEGGDTEAEASRTKPEAATSLPSDGDDGARSVASPAWPPRTIRQHFARLALRAFPSPVRDSLPSFHYFGI	513

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto11g1586	513	MobiDBLite	consensus disorder prediction	163	183	-	-
	Sto11g1586	513	Pfam	Associated with HOX	290	369	IPR006563	-
	Sto11g1586	513	MobiDBLite	consensus disorder prediction	421	455	-	-
	Sto11g1586	513	PANTHER	BEL1-LIKE HOMEODOMAIN PROTEIN 2	76	368	-	-
	Sto11g1586	513	MobiDBLite	consensus disorder prediction	397	480	-	-
	Sto11g1586	513	MobiDBLite	consensus disorder prediction	318	345	-	-
	Sto11g1586	513	MobiDBLite	consensus disorder prediction	318	344	-	-
	Sto11g1586	513	SMART	prehox3	285	402	IPR006563	-
	Sto11g1586	513	PANTHER	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	76	368	-	-

Showing 1 to 9 of 9 entries

Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto11g1586	1	369	Homeobox Transcription Factor Family	AT4G36870	37.471	4.08e-31	125

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto11g1586	-		-	qsu:111998170	271.552

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto11g1586	11	14964727	14967088	Sto11g1586	11	14964727	14967088	ECH

Showing 1 to 1 of 1 entries