Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1582 ATGAACCAGGCGGAGTTAACCACAGAACAGGTTTTGAGGAGGGATATTCCATGGGAGACCTACATGACAACTAAGCTGATCTCAGGCACAAGCCTTCAGCTCTTAAGACGTTATGATCATAGATCGTTAAGTCACAGAGCACAACTGCTGGatgatGATGGTCCAGCTTATGTTCGCGTATTTGTTAATGTTTTGCGTGATATCTTCAAAGAGGAGACTGTAGAATATGTCTTGGCTTTAATTGATGAAATGCTTACAGCAAACCCAAAAAGAGCTAGATTGTTTCATGATAAGTCCCTTTCGAGTGAAGATACCTATGAACctttcttaaatTGCTTTGGAAAGGAAATTGGTTCATACAAGAGAAAAGTTCTGAAAAAACCTTCTCATCCCAGTCGTGGTGTCCCAACTGCTATCAATTGTCTAGCAACTTTACTCAAGGAACCGATTGTAAGGTCTTCCTTTATTCAAGCAGATGGGGTCAAGTTGCTTTTACCTTTGATTTGTCCAGCAACCACTCAACAGTCAATTCAGCTCCTTTATGAAACGTGTCTCTGTGTATGGCTATTATCCTATTACGATCCTGCAATTGAATACTTGGCTACTTCAAGAACCCTTCCACGTCTTATTGATGTCATTAAGAGTTCTACAAAAGAGAAGgttgtTAGAGTAGTTGTCTTGACTCTTAAAAACTTGCTGTCCAAAGGGACGTTGGGTGCTCAAATGGTTGACCTTCAGTTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGCGATGAGGACTTGTTGGAGGCACTGAATTTCTTGGAGGAAGGGCTTAAGGATAACATTAAGAAACTAAGTTCTTTTGATAAGTATAAACAAGAAGTTCTTTTTGGCAATCTGGACTGGTCTCCAATGCATAAAGATCCTATATTTTGGCGAGAAAATATCACCAACTTTGAAGAGAATGACTTCCAGATTCTAAGAGTCCTAATAACAATTTTAGACACGTCTAGTGATCCAAGGACTCTAGCTGTTGCTTGCTTTGACCTTTCACAGTTTATTAATCACCATACTGCTGGAAGGATCATTGTGACGAACCTTAAAGCCAAGGAACGAGTAATGAAACTAATGAATCATGGGAACGCCGAGGTTACCAAAAATGCACTGCTCTGCATCCAAAGGCTTTTCTTGGGTGCAAAGTTCGCTAGCTTCTTGCAGGCTTAA 1215 0.4 MNQAELTTEQVLRRDIPWETYMTTKLISGTSLQLLRRYDHRSLSHRAQLLDDDGPAYVRVFVNVLRDIFKEETVEYVLALIDEMLTANPKRARLFHDKSLSSEDTYEPFLNCFGKEIGSYKRKVLKKPSHPSRGVPTAINCLATLLKEPIVRSSFIQADGVKLLLPLICPATTQQSIQLLYETCLCVWLLSYYDPAIEYLATSRTLPRLIDVIKSSTKEKVVRVVVLTLKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNFLEEGLKDNIKKLSSFDKYKQEVLFGNLDWSPMHKDPIFWRENITNFEENDFQILRVLITILDTSSDPRTLAVACFDLSQFINHHTAGRIIVTNLKAKERVMKLMNHGNAEVTKNALLCIQRLFLGAKFASFLQA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1582 404 Pfam V-ATPase subunit H 127 275 IPR004908 GO:0000221|GO:0046961|GO:1902600
Sto11g1582 404 Pfam V-ATPase subunit H 4 112 IPR004908 GO:0000221|GO:0046961|GO:1902600
Sto11g1582 404 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 94 - -
Sto11g1582 404 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 123 404 - -
Sto11g1582 404 SMART arm_5 354 394 IPR000225 GO:0005515
Sto11g1582 404 SMART arm_5 147 192 IPR000225 GO:0005515
Sto11g1582 404 SMART arm_5 193 234 IPR000225 GO:0005515
Sto11g1582 404 Gene3D - 296 396 IPR038497 -
Sto11g1582 404 PIRSF V-ATP_synth_H 1 129 IPR004908 GO:0000221|GO:0046961|GO:1902600
Sto11g1582 404 PIRSF V-ATP_synth_H 109 402 IPR004908 GO:0000221|GO:0046961|GO:1902600
Sto11g1582 404 Pfam V-ATPase subunit H 281 393 IPR011987 GO:0000221|GO:1902600
Sto11g1582 404 Gene3D - 120 283 IPR011989 -
Sto11g1582 404 Gene3D - 4 119 IPR011989 -
Sto11g1582 404 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 94 IPR004908 GO:0000221|GO:0046961|GO:1902600
Sto11g1582 404 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 123 404 IPR004908 GO:0000221|GO:0046961|GO:1902600
Sto11g1582 404 SUPERFAMILY ARM repeat 8 394 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1582 Sto-Chr11 14915384 14920308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1582 1 404 Primary Pumps ATPases(2) AT3G42050 71.655 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1582 K02144 - mnt:21402594 677.552