Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1560 ATGTCTTCGTCTTCCCCTGATACTGCTCCATCTTCAGAttccaacaataataataattctgataataataataataataacagtgATAATAGTAATTCTCAGTCACCTCCTTCTCCTGATTCATCTTGGGATTCGAATTCACCGCCTTCTCCTGATTCATCTTCTGAATTCAATTTGAATTCACCGCCTTCTCCCGACTCATCTTCCAATTCCGACAACCAAAACGCATCGCCTCCTCAATCTGCAGATTCGAATTCCAATTCCGATtcgaattcaaattcaaattccaattccaatgaTTCCAACTCTGATAATAGATCCTCATCTTCCTCTCCGAATCAGAGGGATGGAAACCGCAATTCCAACTCCAACTCGCCCTCCTCTGGATCCTCACCGTCAACCCCTAATTTCACGCCGAAATCCTCGAAAGGGACGCCGTCGTCACCGGCATTAGCTGATTCCGACAAGGGAGGCGACGGCGGAAGCGACTCTAGAGCCATCGTCGGAGGAGCGCTTGGGGTTGGCTGTGTTCTTCTTGTTTTGATCATAATTTGCGTATTTTGCTgcagaaggaagaagaagagaaagcaaATGTACTATTATAACGATAATCCTGATGCCAAAAACGGCAAACCTGGTTATTATAGCCCCGGGCAAAACAATTGGCACCCAGGTGGGAATGACCATGTGGTGAGGATGCAGCAATCACCAGGAGGAATGGGTATGGGCATGGGCCCTAACAGCAACAGCAGTGGGTGGGGCCCAATGCCTCCACCTCCCCCGCCTCATAGCACAGACATGAGCTCCAATTACTCATTGGGCCCACCACCTCTCCCTCCTCCTTCGCCGGGCCTTGCTTTGGGCCTCACGGGGGGCACCTTTACCTACGAGGACTTAGCCGCCGCCACAGAGGGTTTTGCCGATAAGAATTTGTTGGGACAAGGTGGTTTTGGGTACGTCCATAAGGGAGTTTTGCCCAATGGAAAAGAAGTCGCTGTTAAAAGCTTGAAAGCAGGAAGTGGACAAGGAGAACGAGAGTTCCAAGCTGAGATTGATATGCTTAGTCGTGTCCATCATCGTCATCTTGTGTCACTTAATGGCTATTGCATTACTGGAGGACAAAGAATGTTGGTTTATGAGTTTGTTCCAAATCAGACTCTTGAGTATCACCTTCATGGAAAGGGTTTGCCTACCATGACATGGCCTGATAGGATGCGAATTGCAATAGGATCTGCCAAAGGGCTTGCTTACCTTCATGAAGATtGTCATCCTCGAATTATACATCGTGATATCAAATCCGCTAATGTGCTCCTTGATGATAGCTTCGAAGCTAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTACTGATAACAATACTCATGTCTCAACTCGAGTCATGGGAACATTCGGGTACTTGGCTCCAGAATATGCATCAAGTGGAAAATTGACTGAGAAGTCAGACGTGTTCTCTTTTGGAGTGATGTTATTAGAAATTATAACTGGGAAGCGACCTGTGGATGTGTTAAATGTCATGGATGATAGTTTAGTGGACTGGGCTCGACCACTTCTAACACGTGGACTGGAGGATGGGCACTTTGAGGAATTAGTGGATCCGTTTCTTGAAGGGAATTACAATGAGCAAGAAATGGCTCGCATGGCGGCCTGTGCTTCTGCTAGCATTCGTCATTCTGGCAAGAAGCGTCCTAAAATGAGTCAGATCGTAAGAGCATTGGAAGGAGATGTGTCATTGGACGACTTGAACGATGGAAAGGGAGGGCATGGGAACTTGCTAGCATCATCATCGAGCTCAGACTACGATTCAACAGCATACCAAGCTGACATGAAGAGGTTCAGACAGATTGCTCTATCCAGCCAGGAGTTCGGAAGCAGCGAGGGCTCAAGTGGTGAAATGTCCCACTCACGTGCCACTCCAAGGCAACCCCTTTAG 1950 0.4544 MSSSSPDTAPSSDSNNNNNSDNNNNNNSDNSNSQSPPSPDSSWDSNSPPSPDSSSEFNLNSPPSPDSSSNSDNQNASPPQSADSNSNSDSNSNSNSNSNDSNSDNRSSSSSPNQRDGNRNSNSNSPSSGSSPSTPNFTPKSSKGTPSSPALADSDKGGDGGSDSRAIVGGALGVGCVLLVLIIICVFCCRRKKKRKQMYYYNDNPDAKNGKPGYYSPGQNNWHPGGNDHVVRMQQSPGGMGMGMGPNSNSSGWGPMPPPPPPHSTDMSSNYSLGPPPLPPPSPGLALGLTGGTFTYEDLAAATEGFADKNLLGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDMLSRVHHRHLVSLNGYCITGGQRMLVYEFVPNQTLEYHLHGKGLPTMTWPDRMRIAIGSAKGLAYLHEDCHPRIIHRDIKSANVLLDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEIITGKRPVDVLNVMDDSLVDWARPLLTRGLEDGHFEELVDPFLEGNYNEQEMARMAACASASIRHSGKKRPKMSQIVRALEGDVSLDDLNDGKGGHGNLLASSSSSDYDSTAYQADMKRFRQIALSSQEFGSSEGSSGEMSHSRATPRQPL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1560 649 Gene3D Phosphorylase Kinase; domain 1 288 381 - -
Sto11g1560 649 SUPERFAMILY Protein kinase-like (PK-like) 289 578 IPR011009 -
Sto11g1560 649 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 72 639 - -
Sto11g1560 649 Pfam Protein tyrosine and serine/threonine kinase 310 577 IPR001245 GO:0004672|GO:0006468
Sto11g1560 649 SMART serkin_6 306 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1560 649 MobiDBLite consensus disorder prediction 1 161 - -
Sto11g1560 649 MobiDBLite consensus disorder prediction 1 149 - -
Sto11g1560 649 Gene3D Transferase(Phosphotransferase) domain 1 382 589 - -
Sto11g1560 649 MobiDBLite consensus disorder prediction 623 649 - -
Sto11g1560 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Sto11g1560 649 MobiDBLite consensus disorder prediction 241 279 - -
Sto11g1560 649 MobiDBLite consensus disorder prediction 622 649 - -
Sto11g1560 649 PANTHER RECEPTOR-LIKE KINASE 72 639 - -
Sto11g1560 649 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Sto11g1560 649 ProSiteProfiles Protein kinase domain profile. 306 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1560 Sto-Chr11 14739682 14742356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1560 119 623 Trihelix Transcription Factor Family AT1G70460 49.903 9.26e-153 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto11g1560 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1560 - - gmx:100777163 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1560 11 14739682 14742356 Sto11g1560 11 14739682 14742356 ECH