Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1541 ATGGCATCATCTTGGACACCAAGGCAAAACAAACTATTTGAAAGGGCTCTGGCTTTATACGATAGGGAGACCCCAGATAGGTGGCAGAATGTTGCCAGAGAGGTGGGAAAATCTGTGGATGAAGTTAAAAGGCATTATGAGATCCTCAAAGAAGATGTCAAACGCATTGAGCATGGTCAAGTCCCATTCCCCcactacaacaacaacaacagcaCCTAA 219 0.4064 MASSWTPRQNKLFERALALYDRETPDRWQNVAREVGKSVDEVKRHYEILKEDVKRIEHGQVPFPHYNNNNST 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1541 72 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Sto11g1541 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 71 IPR044636 GO:0003700
Sto11g1541 72 CDD SANT 4 50 IPR001005 -
Sto11g1541 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 71 - -
Sto11g1541 72 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Sto11g1541 72 Gene3D - 2 63 - -
Sto11g1541 72 SMART sant 1 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1541 Sto-Chr11 14604251 14604469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1541 - - lja:Lj4g3v0973380.1 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3841 6 42909889 42910110 Sto11g1541 11 14604251 14604469 ECH
Sto11g1541 11 14604251 14604469 Sto11g1541 11 14604251 14604469 ECH