Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1525 ATGGCCTacctcttttcctttctttccgaCGGCAAAGATCTAACCAAGACACTCGTCTCGACGGGAGCCACCATTATGGTTTTCCACTCCGTCATCAATGAACTCATCCCCACTCGCATTCGCCGCTTTTTCTGTGCCGTCCTCGACCACCTCATCCACCGCTACTTCTCCTCTCAATTCACATTGGTCATTCACCAATTCCACCGACTTAACAACAACCTCATCTATGACGCCGCATTGACTTACTTGAGCCCTAAGATCTCACCCTCCACGCGCCGCCGCAATGTCCTCAGATCCGAGAAGGAGAAAAGCCTCACATTCTCCCTAGAACCCGACGAGGAAATCCACGATTTCTTCAACGGCGCTAAACTAAAATGGATCTTGATATGTCAAGACGCTGATTTTCCTATTCGAAGCTCCAGAAATCGTCGAGATCACCATCATCAAGACCAGATCACCCCGAAGAACCGATATCTTGAGCTCACCTTCCAGAAGCATCACAGGGAGATGGTGGAAAATTCCTACCTGCCTTTCATTCTAGAAAGAGCGAAAATCATGAAGCAAGAGGTCAAGACTCAAAAGATCTTCACCATAGACCACGGAAACCTCTACGGCAATCCGAGCGACACGTGGATGCCGACGAATCTCGACCATCCAGCGACGTTCGAGACGGTTGCGTTGGATCCCGAGATCAAGAAGTTTGTGTTGGACGATCTAGACAAGTTTGTGAGAAGAAAGGAATACTACAGGAAGATTGGGAAGGCGTGGAAGAGAGGATACCTGATGTATGGACCACCGGGAACGGGGAAATCTAGCTTGATTGCTGCAATGGCGAATTACTTGAATTTTGACATCTACGATTTGGATCTATCGGAGATCGAATTCAACTCGGAGCTACGGCGTTTGCTGCTTGGAGTAGGCAATAGGTCCATAATTGTGGTGGAGGACATTGATTGCGTTATTGAGTTTAAGGATCGTAATGCCAAAACAGAGCCCTCCAATTCCAAGACCtctgatgatgataataataaacagGTGACTCTTTCGGGGTTGTTGAATTTTGTGGACGGGTTATGGTCATGTTGTGGAGAAGAACGGATTGTGGTATTCACTACGAACCACAAGGAGAAGCTTGACCCGGCGTTATTGCGTCCGGGTCGAATGGATGTTCATCTCCACTTATCCTATTGTACTCCTCCTGTTTTCAGGCAGCTAGCTGCTAATTACCTCTCTGTACAAGATCATTCTCTTTTTCCAGAGATTGAGGACGCAATTGGGTCTATACATGTCACCCCTGCTCAAATAGCTGAACAGCTTTTGCACTATTCTAATGATGTTGATATTACCCTTAAAGAGCTTGTGAATTTtcttaagaagaagaagaacaacaaAGAAGATAAGGGGGAGCTTCAAGTTGAaaagaagcaagaagaagaGCACTGGAAGCACAAAGTTGATGGTGATGACAACAAACAAGAGGATGATAATAACGACAAGAAAAACTGA 1506 0.4389 MAYLFSFLSDGKDLTKTLVSTGATIMVFHSVINELIPTRIRRFFCAVLDHLIHRYFSSQFTLVIHQFHRLNNNLIYDAALTYLSPKISPSTRRRNVLRSEKEKSLTFSLEPDEEIHDFFNGAKLKWILICQDADFPIRSSRNRRDHHHQDQITPKNRYLELTFQKHHREMVENSYLPFILERAKIMKQEVKTQKIFTIDHGNLYGNPSDTWMPTNLDHPATFETVALDPEIKKFVLDDLDKFVRRKEYYRKIGKAWKRGYLMYGPPGTGKSSLIAAMANYLNFDIYDLDLSEIEFNSELRRLLLGVGNRSIIVVEDIDCVIEFKDRNAKTEPSNSKTSDDDNNKQVTLSGLLNFVDGLWSCCGEERIVVFTTNHKEKLDPALLRPGRMDVHLHLSYCTPPVFRQLAANYLSVQDHSLFPEIEDAIGSIHVTPAQIAEQLLHYSNDVDITLKELVNFLKKKKNNKEDKGELQVEKKQEEEHWKHKVDGDDNKQEDDNNDKKN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1525 501 PANTHER PROTEIN HYPER-SENSITIVITY-RELATED 4-LIKE 11 492 - -
Sto11g1525 501 PANTHER BCS1 AAA-TYPE ATPASE 11 492 - -
Sto11g1525 501 SMART AAA_5 256 398 IPR003593 -
Sto11g1525 501 MobiDBLite consensus disorder prediction 464 501 - -
Sto11g1525 501 Coils Coil 458 478 - -
Sto11g1525 501 Coils Coil 490 501 - -
Sto11g1525 501 ProSitePatterns AAA-protein family signature. 366 384 IPR003960 GO:0005524|GO:0016887
Sto11g1525 501 Pfam Domain associated at C-terminal with AAA 36 129 IPR025753 -
Sto11g1525 501 Gene3D - 211 392 IPR027417 -
Sto11g1525 501 CDD AAA 257 396 - -
Sto11g1525 501 Gene3D - 393 463 - -
Sto11g1525 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 442 IPR027417 -
Sto11g1525 501 Pfam ATPase family associated with various cellular activities (AAA) 261 395 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1525 Sto-Chr11 14441076 14442672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1525 189 389 Miscellaneous Gene Families AT3G47060 30.622 1.12e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3866 6 43049522 43051469 Sto11g1525 11 14441076 14442672 ECH
Sto11g1525 11 14441076 14442672 Sto11g1525 11 14441076 14442672 ECH