Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1517 ATGGCGAGTTTGTTCTCAATAGGCGGCACACAAGAAGAAGCAACCACGGAATTCCCTCAGCCGGAGAcgttatataataataataattattggtATAACAAGAATAATACAAATGAAGACGTGGTGGTATCCTCCTCGTCCTACAGTTACAGATCAGGATTGGAGATTGAGTGGAACCAGGAGTTGCTCACGCGCCCAGTACTTGAACAAGATCTATTGTTGTTAGGGCGGAGTGGGAGCGATGAAACGTCGTCGTCGATGATGCTGATGGGATCGGGGGGACGAGGAGGAATCAGCTGCCAAGACTGCGGGAACCAAGCCAAGAAGGATTGCCCTCACATGCGGTGCAGAACTTGCTGTAAAAGCAGAGGCTTCCACTGCCAAACCCACATCAAGAGCACTTGGGTTCCCGCTCCTAATAAGCGTCGTGAATCACACCAACAACTTCTTCACCCTCCAAAAAGGCCCAGGGATCTTTCTCATCATACCCATACTCATACATCACCAGGATCAGGGTTGGAGCACGAGGATTTTCCTGCCGTGGTCAATTCTCACGCGGAGTTCAAGTGCGTGAGGGTTAGTTCCGTCGATGACGCTGATGAACAATACGCATACCAAACGGCCGTCAACATAGGAGGCCACGTCTTCAGAGGAATTCTCTATGACCATGGTCCTCATTACGGAGGAGACGTCGCCGGAAGCGGCGCGTCTGTTTTACCcacaaccaccaccaccgccggtATGGTTTCGTCGTCTAGTGTGGATCCTTCGTCTTTGTATGATCAACCTCCACTTAATACCAGCTTCATGCCCGGAAGCGTCTCCAACGATGCATGA 837 0.4815 MASLFSIGGTQEEATTEFPQPETLYNNNNYWYNKNNTNEDVVVSSSSYSYRSGLEIEWNQELLTRPVLEQDLLLLGRSGSDETSSSMMLMGSGGRGGISCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHIKSTWVPAPNKRRESHQQLLHPPKRPRDLSHHTHTHTSPGSGLEHEDFPAVVNSHAEFKCVRVSSVDDADEQYAYQTAVNIGGHVFRGILYDHGPHYGGDVAGSGASVLPTTTTTAGMVSSSSVDPSSLYDQPPLNTSFMPGSVSNDA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1517 278 MobiDBLite consensus disorder prediction 144 171 - -
Sto11g1517 278 Pfam Domain of unknown function (DUF702) 97 226 - -
Sto11g1517 278 MobiDBLite consensus disorder prediction 138 176 - -
Sto11g1517 278 PANTHER PROTEIN SHORT INTERNODES 1 270 - -
Sto11g1517 278 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 178 225 IPR006511 -
Sto11g1517 278 MobiDBLite consensus disorder prediction 1 21 - -
Sto11g1517 278 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 270 IPR007818 GO:0003700|GO:0006355
Sto11g1517 278 MobiDBLite consensus disorder prediction 249 278 - -
Sto11g1517 278 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 99 139 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1517 Sto-Chr11 14372986 14374239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1517 1 272 C2H2 Transcription Factor Family AT5G66350 41.515 5.32e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Sto11g1517 DUF702 1.4e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1517 - - gmx:100814589 232.261