Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1499 ATGATGGAGTCCATGGAGTCATGTGTCCCACCGGGGTTTCGCTTCCACCCAACCGATGAAGAACTCGTTGGCTACTATCTCAGAAAGAAAGTAGCTTCTCAGAAGATCGATCTGGATGTCATTAGAGAGATCGATCTTTATCGTATAGAACCATGGGATCTTCAAGAGAGATGTCGGATCGGATACGAGGAGCAGAACGAGTGGTACTTCTTCAGCCATAAGGACAAGAAGTATCCGACGGGGACGAGGACGAACAGGGCTACTATGGCGGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCGGTGTACGACAAGACAAAGCTCATAGGTATGAGGAAGACGCTGGTTTTCTACAAAGGAAGAGCTCCTAACGGCCAGAAAACTGATTGGATCATGCACGAATATAGGCTCGAATCTGATGAGAATGGACCTCCTCAGGCAAGTTAA 447 0.4855 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQAS 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1499 148 SUPERFAMILY NAC domain 5 142 IPR036093 GO:0003677|GO:0006355
Sto11g1499 148 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 143 - -
Sto11g1499 148 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Sto11g1499 148 ProSiteProfiles NAC domain profile. 9 148 IPR003441 GO:0003677|GO:0006355
Sto11g1499 148 Gene3D NAC domain 18 148 IPR036093 GO:0003677|GO:0006355
Sto11g1499 148 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1499 Sto-Chr11 14222097 14222797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1499 2 146 NAC Transcription Factor Family AT2G18060 94.521 3.90e-103 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto11g1499 NAM 2.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1499 - - pop:7480169 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3913 6 43328991 43330395 Sto11g1499 11 14222097 14222797 CCT
Sto11g1499 11 14222097 14222797 Sto11g1499 11 14222097 14222797 ECH