Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1481 ATGGGTATTTGCTTTTCTACCTCCAAAGTCAGTGGCTCTAACAGCAATAGCACAAACGCTGGGGGTACCACCTCCACCATTATTCACAACATTAAAGAAGGTACCAAGTTGAATTCGAAGAAATCTGTTTTTAATAAACAACAAAAATCGAACAATCAAAGGCAAAGGGCTTCGAATGAGAGTCACAAGAATCAGCAGAAGAATTCACAGAAGCAAAGGCCTAGAGATAATCAAAATTCTAGGCGTAAAGCTGGGCCTATACCATGCGGCAAGCGCACAGATTTTGGTTATGAAAAGGATTTCTCATTGCAATACTCCCTTGGAAAATTGTTGGGACATGGGCAGTTTGGTTATACGTATGTTGGGGTAAATAAAGCAAATGGGGATCGGGTGGCCGTGAAGAGACTTGAGAAGAACAAGATGGTTCTCCCTATAGCCGTTGAGGATGTGAAGCGAGAGGTGAAGATATTGAAACAACTTACAGGCCATGAGAATGTTGTCCAGTTCTATAACGCTTTTGAGGATGATTCATATGTATACATAGTCATGGAGTTATGCGAGGGTGGAGAACTGTTAGATCGAATATTAGCCAAGAAGGACAGCCGTTATACTGAAAAAGATGCTGCAGTGGTTGTAAGGCAAATGCTCAAAGTTGCAGCTGAGTGTCATTTACATGGATTGGTACACCGGGACATGAAACCAGAGGTCTTACGGAACAAACCCGATTTCCGCCGAAAACCATGGCCAACCATAAGTAATGCAGCAAAAGATTTTGTGAAGAAATTGCTGGTAAAGGATCCTCGGGCAAGATACACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGGGAGGCATTGGAGATTCCTATTGATATATCTGTACTGGGCAACATGCGGCAATTTGTGAAATATAGTCGATTGAAACAATTTGCACTGAGGGCACTGGCTAGTACGCTTAATGAAGAAGAGTTAGCTGATCTCAAAGATCAATTCGACGCTATAGATGTAGACAAAAATGGTTCTATTAGTTTAGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCGCGCGTGTTAGAGATATTGCAAGCGATAGATAGCAACACAGATGGACTTGTGGATTTCTCTGAGTTTGTTGCAGCTACCATACATGTCCATCAATTGGAGGAGCATGATTCTGAGAAGTGGCAGCAACGGTCAAAGGCAGCTTTTGAGAAATTTGACCTAGACAAGGATGGCTACATTACACCAGATGAACTTAGAATGCATACAGGATTAAGAGGCTCCATCAATCCGCTGCTTGAGGAAGCCGATATCGACAAAGACGGGAAAATCAGCATATCAGAGTTCCGTAGACTTCTAAGAACCGCAAGCATCGGTTCCGGGCAAGTGCTGAGCCCCCGAAAGAACTAA 1440 0.4319 MGICFSTSKVSGSNSNSTNAGGTTSTIIHNIKEGTKLNSKKSVFNKQQKSNNQRQRASNESHKNQQKNSQKQRPRDNQNSRRKAGPIPCGKRTDFGYEKDFSLQYSLGKLLGHGQFGYTYVGVNKANGDRVAVKRLEKNKMVLPIAVEDVKREVKILKQLTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARYTAAQALSHPWVREGGEALEIPIDISVLGNMRQFVKYSRLKQFALRALASTLNEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFSEFVAATIHVHQLEEHDSEKWQQRSKAAFEKFDLDKDGYITPDELRMHTGLRGSINPLLEEADIDKDGKISISEFRRLLRTASIGSGQVLSPRKN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1481 479 ProSiteProfiles Protein kinase domain profile. 105 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1481 479 Gene3D - 323 392 - -
Sto11g1481 479 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Sto11g1481 479 SMART efh_1 329 357 IPR002048 GO:0005509
Sto11g1481 479 SMART efh_1 438 466 IPR002048 GO:0005509
Sto11g1481 479 SMART efh_1 366 394 IPR002048 GO:0005509
Sto11g1481 479 SMART efh_1 408 436 IPR002048 GO:0005509
Sto11g1481 479 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 49 235 - -
Sto11g1481 479 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 235 471 - -
Sto11g1481 479 ProSitePatterns EF-hand calcium-binding domain. 338 350 IPR018247 -
Sto11g1481 479 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Sto11g1481 479 Pfam EF-hand domain pair 329 391 IPR002048 GO:0005509
Sto11g1481 479 Pfam EF-hand domain pair 410 463 IPR002048 GO:0005509
Sto11g1481 479 SUPERFAMILY Protein kinase-like (PK-like) 104 293 IPR011009 -
Sto11g1481 479 MobiDBLite consensus disorder prediction 1 65 - -
Sto11g1481 479 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Sto11g1481 479 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Sto11g1481 479 Gene3D Transferase(Phosphotransferase) domain 1 237 282 - -
Sto11g1481 479 CDD EFh 329 390 IPR002048 GO:0005509
Sto11g1481 479 Pfam Protein kinase domain 105 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1481 479 ProSiteProfiles EF-hand calcium-binding domain profile. 325 360 IPR002048 GO:0005509
Sto11g1481 479 Coils Coil 45 65 - -
Sto11g1481 479 Gene3D Transferase(Phosphotransferase) domain 1 98 236 - -
Sto11g1481 479 Gene3D - 300 462 - -
Sto11g1481 479 MobiDBLite consensus disorder prediction 1 91 - -
Sto11g1481 479 PANTHER SERINE/THREONINE-PROTEIN KINASE 235 471 - -
Sto11g1481 479 PANTHER SERINE/THREONINE-PROTEIN KINASE 49 235 - -
Sto11g1481 479 MobiDBLite consensus disorder prediction 66 80 - -
Sto11g1481 479 SUPERFAMILY EF-hand 314 465 IPR011992 -
Sto11g1481 479 ProSiteProfiles EF-hand calcium-binding domain profile. 442 469 IPR002048 GO:0005509
Sto11g1481 479 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
Sto11g1481 479 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Sto11g1481 479 CDD EFh 410 464 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1481 Sto-Chr11 14062113 14066430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1481 235 476 EF-hand Containing Proteins AT2G17890 85.537 9.30e-147 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto11g1481 Pkinase 2.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1481 K13412 - cpap:110822505 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1481 11 14062113 14066430 Sto11g1481 11 14062113 14066430 ECH