Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1480 ATGGCCTCGTGCGCATCGCTCTATGAGATTCTAGGTGTCTACGCCGGAGCATCCAATCAAGAGATCAAGGCGGCGTACCGGCGACTGGCCAGGGTCTGCCATCCCGATGTGGCGGCGATTGACGGGAAGAACTCGTCGGCGGACGAGTTCATGAAGATTCACGCAGCGTACTCGACCCTATCGGATCCCGTCAAACGCGCGAATTACGatcggagcctcttccggcgtCAACGGCCGTTGACGATGGCGTCGATATTTCCTGGATACACTGGTCGGAACTGGGAGACCGACCAGTGCTGGTAG 303 0.5446 MASCASLYEILGVYAGASNQEIKAAYRRLARVCHPDVAAIDGKNSSADEFMKIHAAYSTLSDPVKRANYDRSLFRRQRPLTMASIFPGYTGRNWETDQCW 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1480 100 SMART dnaj_3 5 65 IPR001623 -
Sto11g1480 100 CDD DnaJ 8 62 IPR001623 -
Sto11g1480 100 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Sto11g1480 100 PANTHER - 2 100 - -
Sto11g1480 100 SUPERFAMILY Chaperone J-domain 3 81 IPR036869 -
Sto11g1480 100 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 2 100 - -
Sto11g1480 100 Gene3D DnaJ domain 1 85 IPR036869 -
Sto11g1480 100 PRINTS DnaJ domain signature 8 26 IPR001623 -
Sto11g1480 100 PRINTS DnaJ domain signature 26 41 IPR001623 -
Sto11g1480 100 PRINTS DnaJ domain signature 45 65 IPR001623 -
Sto11g1480 100 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Sto11g1480 100 Pfam DnaJ domain 7 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1480 Sto-Chr11 14051351 14051653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1480 8 70 C2H2 Transcription Factor Family AT1G74250 42.424 1.36e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1480 - - gmx:100800959 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1480 11 14051351 14051653 Sto11g1480 11 14051351 14051653 ECH
Sto6g3932 6 43455794 43456297 Sto11g1480 11 14051351 14051653 ECH
Sto10g0084 10 650753 651085 Sto11g1480 11 14051351 14051653 ECH