Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1450 ATGTCAGATTTTGTGGCGATTGATTTCCAAATTAAAGATGGCAGGATGCTTGAGGAAGAAGATACATACGTCAAAATCCGAGGATACTGTCACTTCATCTGCAATCATGGAGGAAATTCCGAAATTCTTAAATTCAACTGCTTGGTTTCTCTTGTCTTCGATTTGATTGGTCTTGTCCCACAATGCAGGATGAAGCAGCAGAAACCATGTGAATCAGCAGAAgcaggaggaggaggagcaacAACTTTTATTGAAGTTGGTTGGTGTTGTGTGTGCTTGTCAAGGCTAAAGGAGAAAGATGAGATGAGGGTTCTTCCTTGCTTGCACAAATTCCATAAGCTTTGTGTTGATAGATGGCTTAAGGGTCACCACAAAACATGCCCTCTCTGCAGATTCTCAATGGGAGCAGAAGATAAGTCCCTTTGTGCTGCTGAACCCTTCACTGAAGAAATGGTAATATGGTTTTCTTCCTTCCACATTGCTGGCATCTGA 492 0.3984 MSDFVAIDFQIKDGRMLEEEDTYVKIRGYCHFICNHGGNSEILKFNCLVSLVFDLIGLVPQCRMKQQKPCESAEAGGGGATTFIEVGWCCVCLSRLKEKDEMRVLPCLHKFHKLCVDRWLKGHHKTCPLCRFSMGAEDKSLCAAEPFTEEMVIWFSSFHIAGI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1450 163 SUPERFAMILY RING/U-box 88 135 - -
Sto11g1450 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 138 IPR013083 -
Sto11g1450 163 SMART ring_2 89 130 IPR001841 -
Sto11g1450 163 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Sto11g1450 163 PANTHER TARGET OF ERK KINASE MPK-1 71 140 - -
Sto11g1450 163 PANTHER GB|AAF27103.1 71 140 - -
Sto11g1450 163 Pfam Ring finger domain 89 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1450 Sto-Chr11 13789484 13791472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1450 89 150 C3H Transcription Factor Family AT5G45290 44.444 6.21e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1450 - - gmx:100527665 149.443