Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1438 ATGATGATCCAGGAAGACACTGAGAGCTCTGCGAGTGGAGTCATGCAGTTAAAGAAGGTTCCTCCTCGTCAGAACAGGCAGAAGTTGGAGGTGTATAATGAGGTGCTTCGTCGAGTTCAAGAATCCGATTATGAGGAGGCCAATGTTCCAGGTTTTGATGATCAACTCTGGCTTCATTTCAAACGTCTTCCTGCTAGGTATTTCATGTTTCTGCTTGATTCTACATTTTTCATTTTGACAAATTCACTTGTGACTGCTCCTGCTGAGAAAACCATGGAAAGAGTGTTTGAAACGAATAACATGAAATTTATTACTAGAAATTGTGGATGCTTACGCCTGCGGTACGCTTTGGATGTCAATCTAGCGAGAGCAGAAGATGTTCTTTCTCATAAGAATTTACTGAAATTGGCGGAGGACCCTGATAATCGACCTGCATTTCAAGTACGCTCAGTAAAGGTACATCCTTTTGGTTATGTTGACTCCGTGCACTCAGATCTGTCTGACAAAGAAGATGCAGAGAGCTCTTTAAGCCATTCTTTTAAGCAGGGAATTCATCTGCTACCTACTTTTGGTTCATCCTCTAATCTTGAAGCTCTTGCACTTAAAGCAAGTAAAAACAATATAGAAGATGGGGACAGTGATACTGGTCTGAAACCATCTTCTCACTGGCCCATGCATGAGATTACCTTTTCTACAGTTGACAAACCTAAACTCCTTAGTCAGATAACTTCATTGCTTGCTGAGATTGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCACTGATGGCTTTTCACTGGATGTCTTTATCGTTGAGGGTTGGCATAATGAGGAAAGTGAGGAGCTCAAAGGTGTTTTGGAACAGGAAATTTTGAAGTTTAAGCAGGAGTTGCATGGGTCGAAACATGACACACTTGATGCTGCCGACGATAATCAACAGGAAATTATGGAATCCATTCCTAATTGTGTAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAACCagttgaaatttggagacaaaGTTGGCTGTGGATCATTTGGTGACTTATTCAGAGGCACATATTGCAGTCAAGATGTGGCTATCAAGGTCCTCCAAGCTGAGCGCATAAATGGAGATATGTTAAGAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTCGTGCAGTTCATAGGTGCATGTACTCAACCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCATACATGACTTTCTGCACAAACAAAGGGGTGTGTTTAAGCTTCCATCTTTGCTGAAAGTGGCAATTGATGTCTCCAAGGGAATGAACTACTTGCACCAAAGTAATATAATTCACAGGGACCTCAAGTCTGCCAATCTGCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAGCTCAATCTGGAGCGATGACATCTGAAACAGGAACATACCGCTGGATGGCTCCTGAGATCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGTATAGTTCTTTGGGAGCTTTTAACAGGAGAACTGCCTTACACGTACTTGACCCCATTACAAGCAGCTATAGGCGTGGTGCAAAAGGGTCTAAGACCTACAATCCCTAAGAATGCACACCCAAGACTTTCTGAACTGATCCAGCGTTGCTGGAAACAAGATCCAACGGAGAGACCAGAGTTCTCTGAAATAATAGACATTCTTCAGCAGATATCTAAAGAGGTAGATAAAGAAGCAGATCGACACAAAGATAAATCATCTCACGGCTTTCTCTCAGCACTTAGAAGGGCCAAAAGTTAA 1866 0.4159 MMIQEDTESSASGVMQLKKVPPRQNRQKLEVYNEVLRRVQESDYEEANVPGFDDQLWLHFKRLPARYFMFLLDSTFFILTNSLVTAPAEKTMERVFETNNMKFITRNCGCLRLRYALDVNLARAEDVLSHKNLLKLAEDPDNRPAFQVRSVKVHPFGYVDSVHSDLSDKEDAESSLSHSFKQGIHLLPTFGSSSNLEALALKASKNNIEDGDSDTGLKPSSHWPMHEITFSTVDKPKLLSQITSLLAEIGLNIQEAHAFSTTDGFSLDVFIVEGWHNEESEELKGVLEQEILKFKQELHGSKHDTLDAADDNQQEIMESIPNCVEIPSDGTDVWEIDTNQLKFGDKVGCGSFGDLFRGTYCSQDVAIKVLQAERINGDMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSIHDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQSNIIHRDLKSANLLMDENEVVKVADFGVARVQAQSGAMTSETGTYRWMAPEIIEHKPYDQKADVFSFGIVLWELLTGELPYTYLTPLQAAIGVVQKGLRPTIPKNAHPRLSELIQRCWKQDPTERPEFSEIIDILQQISKEVDKEADRHKDKSSHGFLSALRRAKS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1438 621 ProSiteProfiles Protein kinase domain profile. 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1438 621 SMART serkin_6 341 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1438 621 MobiDBLite consensus disorder prediction 598 613 - -
Sto11g1438 621 ProSitePatterns Protein kinases ATP-binding region signature. 347 368 IPR017441 GO:0005524
Sto11g1438 621 CDD STKc_MAP3K-like 347 590 - -
Sto11g1438 621 Gene3D Transferase(Phosphotransferase) domain 1 420 617 - -
Sto11g1438 621 SUPERFAMILY Protein kinase-like (PK-like) 325 590 IPR011009 -
Sto11g1438 621 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 16 58 - -
Sto11g1438 621 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 108 607 - -
Sto11g1438 621 Pfam Protein tyrosine and serine/threonine kinase 341 589 IPR001245 GO:0004672|GO:0006468
Sto11g1438 621 SUPERFAMILY ACT-like 225 290 IPR045865 -
Sto11g1438 621 ProSiteProfiles ACT domain profile. 227 301 IPR002912 -
Sto11g1438 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Sto11g1438 621 Gene3D Phosphorylase Kinase; domain 1 330 419 - -
Sto11g1438 621 Gene3D - 226 306 - -
Sto11g1438 621 MobiDBLite consensus disorder prediction 598 621 - -
Sto11g1438 621 PRINTS Tyrosine kinase catalytic domain signature 415 428 IPR001245 GO:0004672|GO:0006468
Sto11g1438 621 PRINTS Tyrosine kinase catalytic domain signature 452 470 IPR001245 GO:0004672|GO:0006468
Sto11g1438 621 PRINTS Tyrosine kinase catalytic domain signature 498 508 IPR001245 GO:0004672|GO:0006468
Sto11g1438 621 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Sto11g1438 621 PRINTS Tyrosine kinase catalytic domain signature 561 583 IPR001245 GO:0004672|GO:0006468
Sto11g1438 621 Coils Coil 277 297 - -
Sto11g1438 621 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 607 - -
Sto11g1438 621 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1438 Sto-Chr11 13676509 13685624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1438 1 619 MAP Kinase Kinase Kinase AT4G35780 60.766 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto11g1438 PK_Tyr_Ser-Thr 3.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1438 - - gmx:100803377 862.448