Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1413 ATGGGTCTTTGTATTGGTTGTCTCGCACCCGCTCGCCACTATAATCCTAGAAGACCTCAGGATTCAGATTATTCAGGGAATTTAGAGAAGGAAGAGTCAGATAATTCAGGAGAGGAAATTAGGGGTAATTATAAGTTGAAGGAGTTCAGTATGGGAGAGTTGAAAGCAGCGACGAAGAACTTCAAAACGGAGACGTTGGTGGGAGAAGGTGGTTTTGGGAAAGTGTACAGAGGTTGGTTGGATGGGACGAGTCTTTCGCCTACGAAACCAGGGTCTGGAATCATGGTGGCTATCAAGAGACTGAACCCAAACAGCATGCAAGGCCTTCATGAATGGCAGTCGGAGGTCAAGTTTCAGGGAACCCTCTCTCACCCAAACCTCGTCAAGCTATTGGGTTACTGTGGCGGCCACCACGACGACGCTCAGGAGCTTCTGCTTGTACTGAAAATTGCGATCGGTGCGGCTCAGGGCCTTGCTTTCTTGCACACTAACTCGGAGAATCAAATCATATATAGGGATTTCAAGGCCTCCAATGTACTTCTTGATTCGAATTACAATGCAAAAATATCTGATTTTGGATTGGCTAAATTGGGGCCCACGGCGGGAGAAACACATGTCACCACAAGAATCATGGGCACATTTGGTTATGCTGCTCCTGAATATGTTGCAACagGGCACTTGTATGTGAAGAGTGATGTGTACGGATTCGGTGTGGTGTTGCTTGAATTGCTAACTGGGATGCGAGCACTTGACCCGAAGAGGCTAAATGGACAACAGAATCTAGTAGAATGGATTAAGCCTTGTCTCTCGAataagagaaaattaaaaagtatgatAGATGATAACATAAAAGGTCAATACTCAATAAAAGCAGCACTAGAAGTAGCTCAACTTAGTCTTAAATGCATACAACATGAACCAAAAGATCGTCCTTCTATGAAGGATGTGGTGGAGGCATTACAAGACATTCAAGCTTTACAGCACAAAAATTCAAAGAGAATAggGGTGAGCTTAGCCATGGAGATGCTTGATAGCCCATCCAAGCTAGAGGTCACTGTGGTCCCTTCTGAGATTCCCACAAGTTTGGAGGACCTATTTGCAGCCAAAGTTAGAGGGTCCTGA 1122 0.443 MGLCIGCLAPARHYNPRRPQDSDYSGNLEKEESDNSGEEIRGNYKLKEFSMGELKAATKNFKTETLVGEGGFGKVYRGWLDGTSLSPTKPGSGIMVAIKRLNPNSMQGLHEWQSEVKFQGTLSHPNLVKLLGYCGGHHDDAQELLLVLKIAIGAAQGLAFLHTNSENQIIYRDFKASNVLLDSNYNAKISDFGLAKLGPTAGETHVTTRIMGTFGYAAPEYVATGHLYVKSDVYGFGVVLLELLTGMRALDPKRLNGQQNLVEWIKPCLSNKRKLKSMIDDNIKGQYSIKAALEVAQLSLKCIQHEPKDRPSMKDVVEALQDIQALQHKNSKRIGVSLAMEMLDSPSKLEVTVVPSEIPTSLEDLFAAKVRGS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1413 373 PANTHER OS01G0588500 PROTEIN-RELATED 37 147 - -
Sto11g1413 373 PANTHER OS01G0588500 PROTEIN-RELATED 148 329 - -
Sto11g1413 373 MobiDBLite consensus disorder prediction 16 38 - -
Sto11g1413 373 ProSiteProfiles Protein kinase domain profile. 61 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1413 373 MobiDBLite consensus disorder prediction 15 38 - -
Sto11g1413 373 ProSitePatterns Protein kinases ATP-binding region signature. 67 99 IPR017441 GO:0005524
Sto11g1413 373 Pfam Protein kinase domain 151 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1413 373 SUPERFAMILY Protein kinase-like (PK-like) 42 320 IPR011009 -
Sto11g1413 373 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 148 329 - -
Sto11g1413 373 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 37 147 - -
Sto11g1413 373 Gene3D Transferase(Phosphotransferase) domain 1 138 342 - -
Sto11g1413 373 Gene3D Phosphorylase Kinase; domain 1 50 137 - -
Sto11g1413 373 Pfam Protein tyrosine and serine/threonine kinase 63 140 IPR001245 GO:0004672|GO:0006468
Sto11g1413 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1413 Sto-Chr11 13523844 13528101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1413 29 320 Glycoside Hydrolase AT3G07070 41.875 1.51e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto11g1413 Pkinase 2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1413 - - jre:109007930 399.438