Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1407 atgtctTGTTCTTCGTCGTCAGGATCCGAGGAAGAGGATGAGGGCTTCGATTCCTACAGAAAGGGAGGCTACCACGCCGTCAGGATCGGCGATCAGTTCGCCGGCGGAAGGTACATAGCGCAGAGGAAGCTAGGTTGGGGCCAATTTTCTACCGTCTGGCTGGTTTACGATACTACCACTTCTACATATGTTGCTCTCAAGATCCAGAAGAGTGCATCCCAGTTTTCTCAGGCTGCCCTTCATGAGATCAGTGTTCTTTCAGCCATTTCTGAGGGTGACCCTTCAAACTCAAAGTGTGTTACCCAGTTGATTGACCACTTTAAGCACTCTGGCCCCAATGGGCAGCACCATTGCATGGTCATTGAGTTCCTTGGCGATAGCTTGCTTCGTCTGATCAGATATAACCGTTACAAAGGCATTCCAATGAATAAACTTCGAGAAATTTGCAAATGCACTTTGATTGGTCTGGATTACTTGCATAGAGAACTAGGTATAATCCATTCTGATCTAAAACCTGAAAACATTCTTCTCACTTCCACCATTGATCCTGCCAAAGATCCTGTAAGATCAGGAGGAAGCCCAATTCTAGAGAGGCCAGAGGGAAACATAAATATTGGAGTTTCAAGTCTTATTGagagaaaattgaaaagaagcgCGAGGAGGGCAGTTGCTAAAATATCAGGAAAAACTTCAGTTGGAGGAACAGGAGAGGCTTCAAAACCTGCGAGAAATATTGATGGAATTGATGTGAAATGCAAGATAGTAGATTTTGGGAATGCATGTTGGGCCAATAAGCCATTTGCAGAAGAAATCCAGACAAGGCAGTACAGAGCACCTGAAGTTATACTGCAGGCTGGCTATTCCTTCCCTGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAGCTTGCTACTGGCGATATGCTATTTACTCCAAAGACTGGACAAGGTTTTTGTGAGGATGAGGACCACCTTGCCCTGATGATAGAACTACTTGGAAAGATGCCCCGGAAGCAGGCTGCTATTAGTGGAGCAAAATCCAAGGATTTCTTTGACAGGCATGGGGATCTAAAAAGAATTAGGAGGCTAAAATTCTGGCCATTAGACAAATTTTTGattgataaatataaattcTCAGAGAATGTTGCTCGTGAGTTTTCTGAATTTCTCGTACCACTTCTGGATTTTCAACCAGAGAAGCGTCCAACTGCACAGCAGTGCCTGCAACACCCATGGCTTAATGAGAAATGA 1251 0.4333 MSCSSSSGSEEEDEGFDSYRKGGYHAVRIGDQFAGGRYIAQRKLGWGQFSTVWLVYDTTTSTYVALKIQKSASQFSQAALHEISVLSAISEGDPSNSKCVTQLIDHFKHSGPNGQHHCMVIEFLGDSLLRLIRYNRYKGIPMNKLREICKCTLIGLDYLHRELGIIHSDLKPENILLTSTIDPAKDPVRSGGSPILERPEGNINIGVSSLIERKLKRSARRAVAKISGKTSVGGTGEASKPARNIDGIDVKCKIVDFGNACWANKPFAEEIQTRQYRAPEVILQAGYSFPVDMWSFACIAFELATGDMLFTPKTGQGFCEDEDHLALMIELLGKMPRKQAAISGAKSKDFFDRHGDLKRIRRLKFWPLDKFLIDKYKFSENVAREFSEFLVPLLDFQPEKRPTAQQCLQHPWLNEK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1407 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 414 - -
Sto11g1407 416 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1407 416 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Sto11g1407 416 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1407 416 Pfam Protein kinase domain 250 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1407 416 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Sto11g1407 416 PANTHER OS07G0472400 PROTEIN 7 414 - -
Sto11g1407 416 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1407 416 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Sto11g1407 416 SUPERFAMILY Protein kinase-like (PK-like) 32 415 IPR011009 -
Sto11g1407 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Sto11g1407 416 CDD STKc_SRPK 27 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1407 Sto-Chr11 13497526 13500303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1407 4 414 EF-hand Containing Proteins AT5G22840 51.082 1.60e-165 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Sto11g1407 Pkinase 4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1407 K08832 - gmx:100811724 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4031 6 44043499 44047586 Sto11g1407 11 13497526 13500303 CCT