Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1404 ATGAAGAAAGTTTGGGTTTTGGTGCTTGTGATTCTGTGGAGTTGCTTTTCTCCAAATGGATTAAGTGATGTTTCTAGTACAAGACCCAGTTCAGTTAATATAGGGGCAATTTTGTCCTTCAATTCAACCATTGGCAGAGTGGCAAAAGTTGCAATAGAAGCAGCTGTAGATGATATAAACTCCAACCAAACGATTCTCAATGGAACACACCTTAATATTTCAGTGCAGGACACAAAAGTCTCCACTGGATTTCTAGGGATCATTGAATCACTATTATTGATGGAGAAGGACACAGTAGCCATAATAGGACCTCAATACTCAGTCATGGCTCATGTAATTTCCCACATAGCCAATGAGCTTCAAGTACCCTTACTCTCCTTTGCTGCCACAGACCCTACCTTGTCTTCTCTTCAATTCCCCTTCTTTCTGAGGACAACCCAAAGTGACCAATTCCAAATGGCTGCTGTATCAGAAATTGTTAACTACTACCAATGGAGAGATGTGATAGCCATTTTCATTGATGATGATCATGGAAGGAATGGGATAGCCACTTTGGGAGATAAGCTAGCTGAGAAGCGTTGCAAGATCTCATACAAAGCACCCCTTAGTCCTAATAACATAAATGGAGAAGAGATAAATAGTGCATTAGTCAAGGTAGCTTTAATGGAGTCTAGGGTCATAGTCCTCCACATATACCCTAACATAGGTCTAGATGTCCTTCATGTGGCTCAAACTCTAGGCATGATGGGAAATGGGTATGTGTGGATAGCCACTGATTGGCTTTCTACTATACTAGACACTGACCCAGTAGGCTCTTCTTCACACATGAATGATATTCAAGGTGTGATTACCTTGAGAATGTACACACCAGATTCTGAAAAGAAAAGGAACTTCCTTTCTAGGTGGAGTAATCTAACAAAGGTTGAAAAAGAGGGACCTTTAGGGTTGAACACTTATGGGTTATATGCATATGACACTGTTTGGATTCTTGCTTATGCACTAGATGAATTTTTCAGCAGTGGAGGAACCTTGTCATTTTCTAATGAATCAAGTCTAAACATGTTAAAAGGGGATAGGTTGAATTTGAATAACGTAGGTGTGTTTAATAATGGAAGTTTATTGCTGGAAAAGGctttaaaagtgaataaaactgGTTTAACAGGACAAATGATGTTTAGTTCAGATGTGGAATTGGTTAATCCTGCTTATGAAGTTATTAATGTGATAGGCACTGGGATTAGGAGAATAGGGTATTGGTCAAATTCCTTAGGGCTTCACACAggtgaaaaagaagaagaagaagcacctAAACCTAATCATTCCAAGTCATCAAGTGAGGGACTTTATGGGGTTATATGGCCCGGTCAGACGACTCTGACACCTCGCGGTTGGGTTTTCGCGAGCAATGGGAGGCATTTGAGAATTGGGGTGCCTCTCAGAATTAGTTACCATGAATTTGTGTCCAAAATTGAAGGATCTGAGATGTTTGGTGGTTATTGTGTGGAAGTGTTTACTGCTGCATTGGACTTGTTGCCATATCCAGTTCCTTACAAGTTTATTCCATTTGGGGATGGTAAAACTAATCCTTTGAACTCAGAGCTTCTTCACATGATCACAACTGGTGCATTTGATGCTGTGGTAGGTGATATAACCATTACCACAAACAGAACAAAGATAGTGGATTTTACACAACCATATATTGAATCAGGGCTAGTTGTGGTGGCTCCAATAAGGAAATTGAACTCCAATGCATGGGCTTTCTTGAGACCTTTTACTCCCATGATGTGGTTTGTGACTGGTATGTTCTTCTTTGTGGTGGGAGCAGTTGTGTGGATTTTAGAGAGAAGAGTAAATGATGATTTTAGAGGCCCTGCTAGAAGACAATTTGTCACAATTATATGGTTTAGCTTTTCAACCCTGTTTTTTGCTCATATGGAACAATTGTCTTCTCCAGTGAAGGGAATAGAAAGCCTAGTGACAAGCAATGAGCTAATTGGAATCCTTAGAGGTTCATTTGCAGAGAACTACTTAACAGAAGAGCTCAACATAATGAAATCAAGGCTAGTGCCTCTAAACTCACCAGCAGAATATGAAAAGGCCTTAAGGGATGGACCCACCAATGGTGGTGTGGCTGCAGTCATTGATGAACGTGCTTACATGGAGCTCTTCCTTGCAACTAGATGTGAATTTGGTGTTGTTGGTCAAGAGTTCACCAAAATGGGATGGGGTTTTGCTTTCCAAAGGGACTCTCCCCTAGCAATTGATGTATCCACAGCAATCCTAAAACTATCAGAGAATGGTGATCTTCAAAGAATCCATGACAAATGGCTAACCAGAAGTGCATGCAGCTCAGAGGGAGCCAAACAAGGCATAGACCGTCTTGAGCTCAAGAGTTTTTGGGGTCTCTTCCTTTTGTGCGGCATTGCCTGCTTGGTCGCTCTTCTTTGTTACGTTGTTCGCCTCGCTTTTCGTTTTAGTAGGCACTCGGGTCCCAACCTTGAGGGCCCGACGTCGCGCTCGTCTCGGCTTCGCTCGTTTATTTCGTTTGTGAATGAGAAGGAAGAACAAGAAGACAAGAACAAGCCTAGGGAAAGAGGGTCTTGTAGGAAGGTTGTGCATGAAGATGATTCTCAATGCTAA 2640 0.4095 MKKVWVLVLVILWSCFSPNGLSDVSSTRPSSVNIGAILSFNSTIGRVAKVAIEAAVDDINSNQTILNGTHLNISVQDTKVSTGFLGIIESLLLMEKDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLSSLQFPFFLRTTQSDQFQMAAVSEIVNYYQWRDVIAIFIDDDHGRNGIATLGDKLAEKRCKISYKAPLSPNNINGEEINSALVKVALMESRVIVLHIYPNIGLDVLHVAQTLGMMGNGYVWIATDWLSTILDTDPVGSSSHMNDIQGVITLRMYTPDSEKKRNFLSRWSNLTKVEKEGPLGLNTYGLYAYDTVWILAYALDEFFSSGGTLSFSNESSLNMLKGDRLNLNNVGVFNNGSLLLEKALKVNKTGLTGQMMFSSDVELVNPAYEVINVIGTGIRRIGYWSNSLGLHTGEKEEEEAPKPNHSKSSSEGLYGVIWPGQTTLTPRGWVFASNGRHLRIGVPLRISYHEFVSKIEGSEMFGGYCVEVFTAALDLLPYPVPYKFIPFGDGKTNPLNSELLHMITTGAFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKLNSNAWAFLRPFTPMMWFVTGMFFFVVGAVVWILERRVNDDFRGPARRQFVTIIWFSFSTLFFAHMEQLSSPVKGIESLVTSNELIGILRGSFAENYLTEELNIMKSRLVPLNSPAEYEKALRDGPTNGGVAAVIDERAYMELFLATRCEFGVVGQEFTKMGWGFAFQRDSPLAIDVSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLCGIACLVALLCYVVRLAFRFSRHSGPNLEGPTSRSSRLRSFISFVNEKEEQEDKNKPRERGSCRKVVHEDDSQC 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1404 879 PANTHER GLUTAMATE RECEPTOR 19 646 - -
Sto11g1404 879 PANTHER GLUTAMATE RECEPTOR 646 862 - -
Sto11g1404 879 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 646 862 - -
Sto11g1404 879 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 19 646 - -
Sto11g1404 879 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Sto11g1404 879 CDD GluR_Plant 473 777 - -
Sto11g1404 879 Gene3D - 50 400 - -
Sto11g1404 879 Gene3D - 672 781 - -
Sto11g1404 879 PIRSF IGluLR_plant 1 652 IPR017103 -
Sto11g1404 879 PIRSF IGluLR_plant 645 879 IPR017103 -
Sto11g1404 879 Pfam Bacterial extracellular solute-binding proteins, family 3 532 778 IPR001638 -
Sto11g1404 879 SUPERFAMILY Periplasmic binding protein-like II 449 779 - -
Sto11g1404 879 CDD PBP1_GABAb_receptor_plant 33 425 IPR044440 -
Sto11g1404 879 Gene3D - 468 583 - -
Sto11g1404 879 Gene3D - 584 658 - -
Sto11g1404 879 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Sto11g1404 879 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Sto11g1404 879 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 323 335 - -
Sto11g1404 879 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Sto11g1404 879 SMART GluR_14 474 779 IPR001320 GO:0015276|GO:0016020
Sto11g1404 879 MobiDBLite consensus disorder prediction 853 879 - -
Sto11g1404 879 Gene3D - 148 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1404 Sto-Chr11 13472085 13476787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1404 5 865 Ion Channels AT3G51480 55.161 0.0 1007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1404 K05387 - gmx:100789442 1376.69