Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1402 TTGAAAATGGGGAGGATTAAACCTCAAGCTCTACTACAGCAAagcaagagaaagaaaggacCTGCCCGTATAAGTGCCACCACTATTATATTTTACACCTTGATTCTTGTCTTGATTGTATTTTTCGTGTTCTCGGGATATCGATATTGGTCCCACAGGTCAAGATTTCGATCAGAGAATCAAATGTTAGTCTCTGAACATATTTCTAATTCTATGGATTCAAAAAAATCTGAGCTACCTGGATTTGCTGTTTTAAATACCTCTAAAGGCTCTATAGTAGTAGAACTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGCCAAAAGGGGCACTTCAAAGGAATGCTTTTCCACCGGGATAACCAAGCAAAAGGAGGTACGGAAGATTGGAACGTGAGAGGAAAGCACTATACCAGTATGAAACATGAAGCATTCATGCTTGGAACTTCCAAAGGAAAACATGGGAACAAAGGGAAAGGATTTGATCTTTACATTACAACTGCACCAATACCTGATCTGAATGAGAAGCTCATTGTGTTTGGGCGGGTTGTCAAGGGAGAGGATGTTGTTCAGGAAATCGAAGAAGTGGATACAGATGAACATTACCAACCTAAAATTTCTATTGGGATACTTGATGCAACTCTTAAACAGAAGATCTAA 675 0.3793 LKMGRIKPQALLQQSKRKKGPARISATTIIFYTLILVLIVFFVFSGYRYWSHRSRFRSENQMLVSEHISNSMDSKKSELPGFAVLNTSKGSIVVELYKESAPEVVDEFIDLCQKGHFKGMLFHRDNQAKGGTEDWNVRGKHYTSMKHEAFMLGTSKGKHGNKGKGFDLYITTAPIPDLNEKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKISIGILDATLKQKI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1402 224 Gene3D - 66 224 IPR029000 -
Sto11g1402 224 SUPERFAMILY Cyclophilin-like 81 220 IPR029000 -
Sto11g1402 224 CDD cyclophilin 84 217 - -
Sto11g1402 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 96 111 IPR002130 GO:0000413|GO:0003755
Sto11g1402 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 179 IPR002130 GO:0000413|GO:0003755
Sto11g1402 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 195 IPR002130 GO:0000413|GO:0003755
Sto11g1402 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 2 224 - -
Sto11g1402 224 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 79 220 IPR002130 GO:0000413|GO:0003755
Sto11g1402 224 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 84 218 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1402 Sto-Chr11 13453823 13458537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1402 81 220 U-box Gene Family AT5G67530 28.302 2.47e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1402 - - gmx:100781538 351.673