Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1399 ATGAAGGTCAAGCAAGAACGTCATCAGCATCTTCTTCATGATGCAAGTGATCAATTTGGAATTGGAAGGGATTCATGTAGTAATAATTTTGGATATCATCAAAATGGATCATCAGTGATGGGAGACAAAATTAATGGCAAATTTTACTATGGAATGCCGTCCGCGGGTCTTTCTTCGTGTACAAGAAATTTGACCGATGTTATATCTTTCGCCGGTCGATTAGGCCGCCCAGTCATCGGAATCCACGCATTGAAGCCGACTTTCAAATCGTCTAGGGTAAgcttatatatgaaattatctctatatatttcattatttTTAAGGACTAATAGTAATGGAAGAGGACAAGGGAGTTGCACAGAAGTAAAGAAGAAAAGAACAGAAGAATCCTCAGAAGTAATGTTGAAGAAGCCTAAGCAAGATCAGACATCTACAGCTTCTTCTACAAAGGTGCAAGCACCCAAAGTCAAGCTAAGCGACAGGATTACAACACTACAGCAAATTGTGTCGCCATTTGGAAAGACAGATACAGCATCAGTGCTTTTTGAAGCAATTGGGTGCATCAAGTTTTTACAAGAACAAATCCAgCTACTCAGCAACTCTTACATGAAGACTAACTCGCACAagGATGGATGGGGAAGCTTGGATAGAAAAGAGAAAGATGTGAAGGTTGACCTTAGAAGCAGAGGTCTTTGTTTGGTTCCAATTTCATTTACTCCTCAACTTTACACTGACAATACTGCACCTGATTATTGGACACCACCTTATAGAGGATGCTTCTATAGGTAG 789 0.3866 MKVKQERHQHLLHDASDQFGIGRDSCSNNFGYHQNGSSVMGDKINGKFYYGMPSAGLSSCTRNLTDVISFAGRLGRPVIGIHALKPTFKSSRVSLYMKLSLYISLFLRTNSNGRGQGSCTEVKKKRTEESSEVMLKKPKQDQTSTASSTKVQAPKVKLSDRITTLQQIVSPFGKTDTASVLFEAIGCIKFLQEQIQLLSNSYMKTNSHKDGWGSLDRKEKDVKVDLRSRGLCLVPISFTPQLYTDNTAPDYWTPPYRGCFYR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1399 262 PANTHER TRANSCRIPTION FACTOR BHLH111 4 247 - -
Sto11g1399 262 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 247 - -
Sto11g1399 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 207 IPR036638 GO:0046983
Sto11g1399 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Sto11g1399 262 MobiDBLite consensus disorder prediction 114 150 - -
Sto11g1399 262 MobiDBLite consensus disorder prediction 119 136 - -
Sto11g1399 262 CDD bHLH_AtbHLH_like 157 199 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1399 Sto-Chr11 13431346 13433434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1399 8 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 37.638 3.15e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1399 - - gmx:100527800 301.212