Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1397 ATGGGGAGGATTAAACCTCAAGCTCTATTACAGCAAAGCAAGAGGAAAAAGGGGCCTTCTCGAATAAGTGCCACAACTATTGTTTTTTACACCTTGGTTCTTGTCCTGGTTGGGTATTTCCTGTTCACAGTGTACAGACATTGGTCTCAAAGGTCAAGATTTGGATCAGAGAATCACATGTTAGTCTCTGAGGGTGAAAATTCTTTTGTAGACTCAAAAAAATCCGAGTTACCTGGATATGCTGTTTTAAATACCTCTAAAGGCTCTATAGTAATAGAGCTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTTATTGACTTATGTCAAAAAGGGCACTTCAAGGGAATGCTGTTCAACCGTGTAATTAAGCACTATGTGATTCAGGCTGGGGATAACCAAGGGACTGGAGCTACAGAAGATTGGAACCTCAGAGGAAAGCATTATACAAGTATGAAACATGAAGCATTCATGCTCGGAACTTCCAAGGGCAAGCACTTGAATGAAAGATTTGATCTTTTCATCACAACTGCACCTATACCAGATCTAAATGAGAAGCTCATTGTGTTTGGGCGGGTCATCAAGGGAGAGGATGTTGTTCAGGGCATCTGCACTACGGTTCGCTTCTCTGAAGCAGTGCTGGATTTTCCATGCTTGCAGGGATGTGATGGAGATTCATTGAGATGGCTATTTCAAGGCCAATTTGGAGGGCCCAGAGTTCACTCAGAAGTGCGTGTCCACAACCTGGGTAGTGACAATAGCTGA 768 0.4271 MGRIKPQALLQQSKRKKGPSRISATTIVFYTLVLVLVGYFLFTVYRHWSQRSRFGSENHMLVSEGENSFVDSKKSELPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKGHFKGMLFNRVIKHYVIQAGDNQGTGATEDWNLRGKHYTSMKHEAFMLGTSKGKHLNERFDLFITTAPIPDLNEKLIVFGRVIKGEDVVQGICTTVRFSEAVLDFPCLQGCDGDSLRWLFQGQFGGPRVHSEVRVHNLGSDNS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1397 255 CDD cyclophilin 82 204 - -
Sto11g1397 255 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 206 IPR002130 GO:0000413|GO:0003755
Sto11g1397 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Sto11g1397 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Sto11g1397 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Sto11g1397 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Sto11g1397 255 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 204 IPR002130 GO:0000413|GO:0003755
Sto11g1397 255 SUPERFAMILY Cyclophilin-like 77 205 IPR029000 -
Sto11g1397 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 205 - -
Sto11g1397 255 Gene3D - 66 213 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1397 Sto-Chr11 13404757 13410128 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1397 73 197 U-box Gene Family AT5G67530 30.303 6.68e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1397 - - gmx:100781538 355.525