Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1393 ATGGTTGCGTCTCAGCCTCTTAAAGCTGGCCAAGTTGTTCTCAGAGATTCTCCTATAATTCTTTATTCTGCTTTGCCTTTAATTCCGcagtcctcctcctcctcttcccctgTCTTCTGTGACTATTGTTTCAGGACCCTGTCACAGTCGCCCTCACTGGGAGGTCCATCTTCCACAGTTTTGTGCCCTTCTTGTTGCCATCATCGTTTTTGTAGCCCCAAGTGTTTATCTCTCGCCCAAAATGTGTTGCACACTTCTTGGGTATGTAAAGCATTATCTCAGCTCCGAGTCAATTCTGCATTGCTTGAACAGCCCCTCGAGTGCCAAGTCCAAGTGAATTTTCTCGTTGCTGCCTACAATCTTGCCAGTGTCTCCccatcaaattttcaaattttgctTTCTCTTCAAGGTTCTTCTGATGATGCCACCATCGCCGCAGCTCAGTTCCTGCACTCCCTTATGTCGTCCCTCTGCCCATTTGCGCCAACTAGCCTTCAGAAGCTATTTTCTTTGGAACTCACTGCTGCCCTGCTGGCCAAGGACAAACTAAATGCATTTGGGTTGATGCAACCCTTCTCTGAAGACAATGAAGAGAGATCTGTTAGAGCTTATGGTATTTACCCTTATGCCTCTTTCTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATACTAGTGCATCTGATGACAACCATAACACTGACATTATTATTAGGATGATTAATGATGCTCCCCAAGGTAGGGAAATCTGTTTGAGCTATTTCCCTGTGAATGAAAACTATTCTAGTAGGCAGAAGAGATTGATGGAAGACTATGGCTTTGCCTGCAAGTGTGATCGATGTAATATTGAAGCAAATTGGTCAGATAATGAGAGTGTTGAAGATGATGCAGAGGATATAGAAGAGGCGATGGATGAGGATCAGTATGAAAATATGGCAGCCTCAGACACTGAAATAAATTCCCAAGGAGAGAACAATGATTTTCCTCATGCatatttctttttgaaataCATGTGTGATAGAAATAATTGCTTTGGTACTTTAGCTCCTTTACCCCCACAGGGTGATGCTCCTTCTGATGTCATGGAATGTAATGTGTGTGGCAACTTAAAGCGTGACAATGGGTTTGATGGTGATGGAGGACAAGATGGAGTTTCCATGGAGGACTGA 1182 0.4154 MVASQPLKAGQVVLRDSPIILYSALPLIPQSSSSSSPVFCDYCFRTLSQSPSLGGPSSTVLCPSCCHHRFCSPKCLSLAQNVLHTSWVCKALSQLRVNSALLEQPLECQVQVNFLVAAYNLASVSPSNFQILLSLQGSSDDATIAAAQFLHSLMSSLCPFAPTSLQKLFSLELTAALLAKDKLNAFGLMQPFSEDNEERSVRAYGIYPYASFFNHDCLPNACRFDYVDTSASDDNHNTDIIIRMINDAPQGREICLSYFPVNENYSSRQKRLMEDYGFACKCDRCNIEANWSDNESVEDDAEDIEEAMDEDQYENMAASDTEINSQGENNDFPHAYFFLKYMCDRNNCFGTLAPLPPQGDAPSDVMECNVCGNLKRDNGFDGDGGQDGVSMED 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1393 393 CDD SET_SMYD 183 285 - -
Sto11g1393 393 SUPERFAMILY SET domain 2 286 IPR046341 -
Sto11g1393 393 Gene3D - 103 185 - -
Sto11g1393 393 Gene3D SET domain 1 285 IPR046341 -
Sto11g1393 393 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 386 IPR044238 -
Sto11g1393 393 ProSiteProfiles SET domain profile. 1 259 IPR001214 GO:0005515
Sto11g1393 393 Coils Coil 294 314 - -
Sto11g1393 393 Pfam SET domain 72 258 IPR001214 GO:0005515
Sto11g1393 393 Gene3D - 39 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1393 Sto-Chr11 13389897 13391078 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto11g1393 SET 3.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1393 - - gmx:100783406 591.652