Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1375 ATGACTCGTATACTCAGAATTCTCAAGTCCTCCGATAACGCCACCGCCGTCGCTTCGGCGCCGCCTCCGGAGGCCGTGGCTTTGGAATCAGACTTCGTGGTCATCCTCGCCGCTCTGCTCTGCGCTCTCATATGCGTGGTGGGGCTCATCGCCGTCGCCCGCTGCGCGTGGCTCCGGAGAGGCAGCTCCGGCGCCGGCGGATCTCCGAGGCAGGCTCTGGCGAACAAGGGGCTTAAGAAGAAGGTGCTTCAGTCCATACCTAAATTCACTTACATTGACGGGAATCCAGAGAAGCGGTTGAGCTCGTCGGAGTGCGCGATTTGCTTGGCCGAGTTCGCCGACGGCGACGAGATCCGAGTTCTGCCGCAGTGTGGTCATGGATTCCATGTGGGCTGCATAGACATGTGGCTTGGGTCCCACTCTTCTTGCCCTTCTTGCCGCCAGATTCTTGCCGTCACGGGGAGGTGCCAGAAGTGCGGCCTTTACCCGGCCGTTGGCGACGGGGAAGCCGCCGGAGTCCGGTTCAGTGAACCGGAGCTTAAGTCCAGAGAAAACGACAATGCAACtgcttctaataataataataatgttaattaCTCTGTAGTTAATAATGTGACAGTGACCGAGAGTAGCAAAGAGCAGAGTATCATGAGAGAACTCCTGATCTTCCCGTTAAGAGAGGTTCCTCATCTTCTTCTTGGAGATAGCTCATGA 714 0.5518 MTRILRILKSSDNATAVASAPPPEAVALESDFVVILAALLCALICVVGLIAVARCAWLRRGSSGAGGSPRQALANKGLKKKVLQSIPKFTYIDGNPEKRLSSSECAICLAEFADGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRQILAVTGRCQKCGLYPAVGDGEAAGVRFSEPELKSRENDNATASNNNNNVNYSVVNNVTVTESSKEQSIMRELLIFPLREVPHLLLGDSS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1375 237 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 191 - -
Sto11g1375 237 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 191 - -
Sto11g1375 237 Pfam Ring finger domain 104 147 IPR001841 -
Sto11g1375 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 151 IPR013083 -
Sto11g1375 237 SUPERFAMILY RING/U-box 90 153 - -
Sto11g1375 237 SMART ring_2 105 146 IPR001841 -
Sto11g1375 237 CDD RING-H2_EL5_like 104 147 - -
Sto11g1375 237 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1375 Sto-Chr11 13259032 13262550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1375 1 159 C3H Transcription Factor Family AT1G76410 62.805 5.22e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1375 - - gmx:100787383 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4042 6 44107693 44108334 Sto11g1375 11 13259032 13262550 CCT