Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1363 ATGGAGTTTGGACATGGGAGTATGAGCAACGAGGCTATTGAGTTTGATATGATGGGTTTAGGGGAAGATGCCTCCATTGACATTGAGCACCCtgttgaagaagatgatgatgacctTGTGGACCAttttgctgctgctgctgctgctgctgctactactaccaTTCATGATACCAATATGGGACCTCATATGCCTGAAGGTGATACAATTCTTGAACCTTATCAAGGTATGGAATTTGAATCAGAAGAAGCTACCAAGGCCTTTTACAATTCCTACGCACGTCGTGTAGGGTTTAGTACACGTGTAAGCATGTCTCGGCGCTCCAGGCGTGATGGTGCTATAATTCAGAGATCTTTTGTGTGTGCTAAGGAAGGTTTCCGTGTAGAAAAGGAGAAGCCTTTATATGATGGTAGAGTCAAGCGGCCTCGTGCTGAAACTCGTGTTGGTTGTAAGGCTATGTTGGTTGTAAAAATTCAAGAGTCTGGCAAATGGGTTGTTTCTTCTTTTGTCAAGGAACATAACCATGAATTGGTTCCGCCAGATAAGGTACATTGTTTGCGTTCTCATCGCCATGTCTCGGGTCCAGCGAAGTCATTGATTGATACTTTGCAGGGTGCTGGAATAGGGCCTAGTGGAATTATGTCTGCACTTATCAAAGAATATGGTGGGATTAGCAATATTGGTTTCACTGAGCGTGACTGTAGGAATTATATGAGAAGTAGCAGGCAAAGGACCCTTGGAGGTGACACCCAAATCCTCTTGGATTATTTGAGGAGCAAACAAGCTGAGAATCCTTCATTTTTCTATGCTGTACAAGGTGATGAAGATCATTGCTTGAACAATATCTTCTGGGCTGATCCTAAAGCCAGGACTAATTACACTTACTTTGGTGATACTGTCACCTTTGACACAACATATAGGTCAAACCGCTATAGATTGCCCTTTGCACCTTTCACTGGAGTTAATCATCATGGGCAACCTGTATTATTTGGTTGTGCCCTTCTGATAAATGAATCTGAGGCATCTTTTGTCTGGCTGTTCAAGACCTGGCTTGATGCAATGTCAGGGCGGCCTCCTGTGTCAATTACTACAGATCATGATAGGGTAATTCGTGTGGCAATCAGCCATGTTTTTCCTGACACTCGTCTCAGATTCTGCAAGTGGCATATTTTTAAAGAATTCCAAGAGAAGTTGTCTCATGTACTTTTCGAACATCCTAATTTTGAAGCCGACTTCCATAAATGTGTTAACCTAACAGAGTCTGTTGAGGAGTTTGAGTCTTGTTGGTACTCTCTAGTTGATAGGTATCATCTCAGAGATCATGAATGGCTCCAAGCAATTTATGGTGACAGGTGGCAGTGGGTTCCAGTTTACTTGAGGGACACATTTTTTGCGGAAATGTCAATAACGCAGCGGAGTGACAGCATAAATTCTTACTTTGATGGATATATCAATGCATCTACAACTCTTCACCTCTTTGTTAAGCTGTATGAGAAGGCTCTGGAAAGCCGTTATGAGAAAGAAGTCAAGGCTGATTATGACACAATAAACACTGCTCCAGTTCTTAGGACTCCATCACCTATGGAGAAACAGGCAGCTGGAGTTTACACTAGAACATTATTTATGAAATTTCAAGAAGAATTAGTTGAGACACTGACTTTCTTGGCTACcaaagtagaagaagaagaaatgataACTACGTATAGAGTTGCAAAATATGGGGAAAATCATAGGGTCTACTGCGTCAGATTTAACATTTTTGAGATGAAAGCTACTTGTAGTTGCCAGATGTTTGAGTTTTCTGGTCTACTTTGTAGACATATATTGACTGTTTTTAGGGTGACAAATGTTCTTACTTTACCatctcattatattttaaaaagatggACTAGAAATGCCAAAAGTGGTGTCATATTGGATGAAAATACCAGTGATTTGTTAAATGGTGCGCGGGAATCTCTAACTGTCCGATACAATAATCTTCGTCATGAGACTTTCAAGTATGTTGATGAGGGAGCAAAAACTCCGGAGGTTTATAATGTGGCTATGAGTGCTCTTCAGGAGGCTGCCAATTTAGTGGCCCTTGCTAAAAAGAATGGTGGAAGACTAGTTATTTCAAATGGAACTTGTAAAGAAGGACTTTGTCTGAGCTGTGAAGTAAATAAAAATAGTCATCCTCAATGTGGTTCTGAACAAACCTCATCTAAGGATGAGCTGGACCAGACAATTGAGAAGTTGACGCGGCAGCTGAATCGAGCTCGAAGGAAGTGTGAAGATTACAGGTCCAACTTACTATCAATTTTGAAAGATATTGAGGAGCAGAAGCTACAGTTATCTGTTAAAAGTAATGCTCCCCTGTCTTCCAGCAATGCAATTGGATTGCATTCCAAGCATGCTCTTCCTCTTCCATGGTTCTGCATCTGCCCTTGA 2430 0.3963 MEFGHGSMSNEAIEFDMMGLGEDASIDIEHPVEEDDDDLVDHFAAAAAAAATTTIHDTNMGPHMPEGDTILEPYQGMEFESEEATKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKPLYDGRVKRPRAETRVGCKAMLVVKIQESGKWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLRSKQAENPSFFYAVQGDEDHCLNNIFWADPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKTWLDAMSGRPPVSITTDHDRVIRVAISHVFPDTRLRFCKWHIFKEFQEKLSHVLFEHPNFEADFHKCVNLTESVEEFESCWYSLVDRYHLRDHEWLQAIYGDRWQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLHLFVKLYEKALESRYEKEVKADYDTINTAPVLRTPSPMEKQAAGVYTRTLFMKFQEELVETLTFLATKVEEEEMITTYRVAKYGENHRVYCVRFNIFEMKATCSCQMFEFSGLLCRHILTVFRVTNVLTLPSHYILKRWTRNAKSGVILDENTSDLLNGARESLTVRYNNLRHETFKYVDEGAKTPEVYNVAMSALQEAANLVALAKKNGGRLVISNGTCKEGLCLSCEVNKNSHPQCGSEQTSSKDELDQTIEKLTRQLNRARRKCEDYRSNLLSILKDIEEQKLQLSVKSNAPLSSSNAIGLHSKHALPLPWFCICP 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1363 809 Coils Coil 736 763 - -
Sto11g1363 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 766 IPR031052 GO:0006355
Sto11g1363 809 Pfam MULE transposase domain 300 392 IPR018289 -
Sto11g1363 809 ProSiteProfiles Zinc finger SWIM-type profile. 580 616 IPR007527 GO:0008270
Sto11g1363 809 Pfam FAR1 DNA-binding domain 88 179 IPR004330 -
Sto11g1363 809 SMART 26again6 591 618 IPR006564 GO:0008270
Sto11g1363 809 Pfam SWIM zinc finger 588 614 IPR007527 GO:0008270
Sto11g1363 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 48 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1363 Sto-Chr11 13168006 13171621 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto11g1363 MULE 4.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1363 - - gmx:100782414 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1363 11 13168006 13171621 Sto11g1363 11 13168006 13171621 ECH