Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1359 ATGCTTTCCCTCCAATGCAGCACCACCGCCATCCTCCGCCGCCGCAAGCCTGACATGGGTCCACAGCCACGCCTCGTCGCCACCGTTGCCGCCGCCATCTTCACACTACAGCTTCTCTTCCCGGCGGCCATCTCCCAACCTCACAATCCCAAAACATTCAATCGCGCTTTCGGTCCCTTCACCTTCTCCGATTACAGCACCTTCCACGTCATACCTCCGGCGTCAATCAACTTCGGAGCTCTCCAAGTAACGCCGGACACCGCCGGCAACGTCAACTTCACAGACACCACCGGCCGAATCCTCTACCGCGAACCATTCAAGCTCTGGGAATCCAACGGAAGACTCGCCTCCTTCAACACCTCCTTCCTCATCAACGTCTTCCGCGTCGGAAACGCCACTCCCGGCGAAGGCGTAGCCTTCGTGATTTCCCCTTCGCTCGACCTCCCTCGCAACAGCCACGGCCAATACCTCGGCCTCACCAACGCCAGCACCGACGGCAACTCCACCAACCAGATCGTCGCCGTCGAATTGGACACGGTGAAGCAAGACTTCGACCCGGACGACAACCACATCGGCCTCGACATCAACACCGTCCGATCCAAACGCACCGTATCGCTCTCCCAATTCGGAATCCAGATCGCTCCAAACGGCACCAAATTCTACGTAATCTGGATCGATTACAACGGCACGAGCAAATCAATCAACGTATTCATCACCGAACAACCAAGCAAAGACGCTCCAATAGTACcaaaacctaaaaaccctaTCCTAACCTCAGATCTGGACCTCAAGAGCACCGTGAAACAGAGCTCCTACTTCGGATTCTCCGCCTCCACGGGAACCAAATTCGAACTCAATTGCGTGCTGAGATGGAACCTGACGGTGGAGATTCTTCCGGAGAAGAAGAGAATCGGAGAATCCGTACGGATTGGATTGGGAATAACGGGAGGAGTGTGTGTGATGATGATAGTGATTGGTGGATTAGGGTATTGGGTGTatagaaggagaaggagaaggagtggGTCGGATGAACAAATATTGGGGACGTTGAAGAGCTTGCCTGGTACGCCTAGGGAGTTCTCgttcaaggaattgaagaaGGCGACGAATAATTTCGAGGAGAAGCGTAAGCTAGGAGAAGGTGGATACGGCGTCGTTTTCAGGGGGAATTTAGCGAAGGAGAAGATGGAAGTAGCCGTTAAGAGATTTTCAAGGGATAACATGAAGAGTAAAGATGATTTCTTGGCTGAGCTCACTATCATCAATCGCCTTCGTCACAAGCATCTCGTTAGATTACTCGGTTGGTGCCACAAGAATGGAGTATTACTCTTAGTCTACGAATTCATGCCCAATGGAAGCTTAGACAACCACCTTTTCtgtgatgaagaagaaggaataAATAGCCGCAGCCGCAGCCTAACCCCTCTAAGCTGGAACCTTCGCTACAAGATCATCTCAGGAGTGGCTTCAGCCCTTCATTACCTCCACAACGAGTACGACCAGAAAGTGGTCCACAGAGACCTCAAAGCCAGCAACATCATGCTTGACTCCGACTTCAACGCCCGCCTCGGCGACTTCGGCCTCGCTCGAGCCTTGGAGCACGAGAAGACCTCCTACGCGGAGCTCGGGGCGGCCGGGGTCCACGGCACGATGGGCTACATCGCCCCCGAGTGCTTCCACACGGGCACGGCCACCCGGCAGTCGGATGTGTACGGGTTCGGGGCGGTGCTGCTGGAAGTGGTGTGTGGTCAGAGGCCATGGACTAAGAATGAAGGGTGCCCTTGCTTGGTGGATTGGGTGTGGTCCTTGTTTAGGGAAGGGAGGATCCTAGAGGCTGTGGATTGTAGGCTTGGGAATGAGTATGTGGAAGAAGAGGCAGAGAGGATATTGAAATTGGGATTGGCTTGTTCCCATCCTATTGCTTCTGAGAGGCCTAAGATGCAAAGTATTGTGCAGATTATTTCTGGGTCTGTGCCTGTGCCTCATGTGTCTCCTTTTAAGCCTGCTTTTGTGTGGCCTGCTGCTGTGGATTTGGCAAGCTTTGCTAGTGATTTTGATTTCACTACTGCTTCTACTACCACTGACTGTACTCCCATTCATTCTACTTCAAACATACCATAG 2121 0.513 MLSLQCSTTAILRRRKPDMGPQPRLVATVAAAIFTLQLLFPAAISQPHNPKTFNRAFGPFTFSDYSTFHVIPPASINFGALQVTPDTAGNVNFTDTTGRILYREPFKLWESNGRLASFNTSFLINVFRVGNATPGEGVAFVISPSLDLPRNSHGQYLGLTNASTDGNSTNQIVAVELDTVKQDFDPDDNHIGLDINTVRSKRTVSLSQFGIQIAPNGTKFYVIWIDYNGTSKSINVFITEQPSKDAPIVPKPKNPILTSDLDLKSTVKQSSYFGFSASTGTKFELNCVLRWNLTVEILPEKKRIGESVRIGLGITGGVCVMMIVIGGLGYWVYRRRRRRSGSDEQILGTLKSLPGTPREFSFKELKKATNNFEEKRKLGEGGYGVVFRGNLAKEKMEVAVKRFSRDNMKSKDDFLAELTIINRLRHKHLVRLLGWCHKNGVLLLVYEFMPNGSLDNHLFCDEEEGINSRSRSLTPLSWNLRYKIISGVASALHYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALEHEKTSYAELGAAGVHGTMGYIAPECFHTGTATRQSDVYGFGAVLLEVVCGQRPWTKNEGCPCLVDWVWSLFREGRILEAVDCRLGNEYVEEEAERILKLGLACSHPIASERPKMQSIVQIISGSVPVPHVSPFKPAFVWPAAVDLASFASDFDFTTASTTTDCTPIHSTSNIP 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1359 706 CDD STKc_IRAK 378 654 - -
Sto11g1359 706 ProSiteProfiles Protein kinase domain profile. 372 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1359 706 ProSitePatterns Legume lectins beta-chain signature. 173 179 IPR019825 -
Sto11g1359 706 Gene3D - 56 309 - -
Sto11g1359 706 SMART serkin_6 372 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1359 706 Pfam Protein kinase domain 372 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1359 706 PANTHER - 43 678 - -
Sto11g1359 706 CDD lectin_legume_LecRK_Arcelin_ConA 64 295 IPR001220 GO:0030246
Sto11g1359 706 Gene3D Phosphorylase Kinase; domain 1 357 448 - -
Sto11g1359 706 SUPERFAMILY Concanavalin A-like lectins/glucanases 57 297 IPR013320 -
Sto11g1359 706 ProSitePatterns Protein kinases ATP-binding region signature. 378 401 IPR017441 GO:0005524
Sto11g1359 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Sto11g1359 706 SUPERFAMILY Protein kinase-like (PK-like) 353 653 IPR011009 -
Sto11g1359 706 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 43 678 - -
Sto11g1359 706 Pfam Legume lectin domain 60 298 IPR001220 GO:0030246
Sto11g1359 706 Gene3D Transferase(Phosphotransferase) domain 1 449 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1359 Sto-Chr11 13147052 13151213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1359 65 666 Receptor kinase-like Gene Family AT3G53810 39.560 8.40e-132 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto11g1359 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1359 - - gmx:100784558 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4061 6 44255327 44258247 Sto11g1359 11 13147052 13151213 ECH
Sto11g1359 11 13147052 13151213 Sto11g1359 11 13147052 13151213 ECH