Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1357 ATGACCATTGATATGCCATCATCCATGGCCCAAAGTGTGAGGACAAACAGATCTTCCTTTAGTAACGAGGATACTCCTTTGCATAAATATGCTGCTGTTGTCAATGGTGATGACTATGACAGTGATAGCTCCAATTTTGCACCACCCACACCAAGAACACTAACAATGGCTATTCCAGCAGAACTCGCTGGAGCTGTACCCTTGATAGATAAATTCCAgGTGGATGGGTTTCTAAGATTGATGCAGAAACAAATTCATTCTGCTGGGAAACGTGgatttttttctaaaagatCTGTAGGCCCTCAAGTTCGAGAGAAGTATACATTTGAGGAAATGTTGTGTTTCCAAAAGGATCCTATACCAACATCACTGCTTAAGATTAATAGTGATTTGGTAAGCCGGGCAACAAAACTATTTCagataattttgaaatatatggGAGTAGACTCATCTGATCATGTAACTCCTATAAGCTTAGACGAAAGAGTTGAGCTTGTAGGGAAACTATACAAGCAAAGTTTGAAGCGTTCGGAACTCCGAGATGAACTCTTCGTTCAAATATCAAAACAAACTAGAAATAACCCTGAGAGGCAATATTTGATTAAAGCTTGGGAGCTGATGTATTTATGCGCTTCTTCCATGCCGCCTAGTAAAGACATTGGAGGATATATATCTGAATAcgttcataatttagcacataATGCAACTACTGATTCTGAAATCCAAGCCCTTGCGCTAAATACATTAAATGCCTTGAAGCGATCTGTCAAGGCTGGGCCGAGGCATATTATGCCTGGGCGTGAGGAGATTGAAGCTCTACTGACTGGGAGAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACTTTTGAAGAAATTACATATGACATGGCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGGGATCATTAAACTGTCAACACACACTAGCTTTAGTCTGTTTGAGTGCCGTAAAGTTGTGACCAGCTCCAAATCACCTGATTCTGGAAATGGCATTGGTTTAACTGCTCTTTTATGGTACACAGAGGAGTACATTGCGTTGGATGATAACAAATATATAGGGGACCTCTTGGCGGAATTTAAGGCAGCAAAAGATCGAAGTAAGGGGGAAATCTTGCACTGTAAACTGATATTTAAGAAAAGGCTATTTCGAGAGTCTGATGAAGCTGTAGCAGATCCAATGTTCGTTCAATTGTCCTATGTTCAATTACAACATGATTATATTCTGGGTAATTATCCTGTTGGAAGGGATGATGCTGCCCAACTATCTGCATTGCAAATATTGGCTGAAATAGGATTTGTTAGAGCACCTGAAACATGCACTGACTGGGATTCACTTCTGGAGAGATTCCTGCCCAGACAAATTGCAATAACACGAGCAAAACGGGAATGGGAGCTGGACATTCTTTCTCGCTatcattcattgGAGCATTTGACAAAAGATGAGGCAAGACAGCAGTTCCTGCGTATATTGAGAGCACTTCCTTATGGGAATTCCGTTTTCTTCCATGTTCGCAAGATTGATGATCCTATTGGACTTCTGCCTGGGAAAATAATATTGGGCATTAACAAGAGAGGGGTTCATTTCTTCCGTCCAGTTCCAAAAGAATATCTTCATTCAGCTGAGTTAAGAGACATAATGCAGTTTGGAAGTAGCAATACTgcagtattttttaaaatgcgAGTTGCAGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGgGAGAGGAAATTTGTGTAGCTCTTCAGACACATATCAATGATGTAATGTTGCGCCGCTATTCAAAAGCACGATCTTCTGGTGGTGGTTCTGTAAATGGAGATATTGCTAACAATTTTAAGACTCCTAATTTAGAAATATATGAGAAGCGTGTTCAAGACTTAACAAAAGCTGTTGAAGAATCTCAAAGAAATGCTGATCAATTGCTGGAAGAATTGCGTGAAAAGCAAATGCAAGAAGAGAAAATGCAAGAAGAATTGGAGGCCTTGAAAGAATCCTTAAATGCTGATAAACAAAATCTTGAGGAAATTACATGTGATCGTGATAGGCTTAGATCAATGTGCAATGAAAAAGATAAGGCACTTCAGGCTGCAATGCTAGAGAAAAGGAATATGGAAGCAAGATTGGCCAAGTTGAGTAATATGATGGTAGAGAACACAAAAAAGGAGTCTGACAGAGCAAATAGCGAGGATCTAAATAAGCTTGAAGATGAGCTAAAACTTCGTAAAGTAGAGCTGCTTACAGCAGAAGAAACTATTAAAAGATTATCAAATGAAAAGTTGATTTTGGAACAGAAGCTATCAATGCTGGAGAAGAAGAATGCTGATGAGGCAATATATAACATTTAA 2379 0.3825 MTIDMPSSMAQSVRTNRSSFSNEDTPLHKYAAVVNGDDYDSDSSNFAPPTPRTLTMAIPAELAGAVPLIDKFQVDGFLRLMQKQIHSAGKRGFFSKRSVGPQVREKYTFEEMLCFQKDPIPTSLLKINSDLVSRATKLFQIILKYMGVDSSDHVTPISLDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYISEYVHNLAHNATTDSEIQALALNTLNALKRSVKAGPRHIMPGREEIEALLTGRKLTTIVFFLDETFEEITYDMATTVADAVEELAGIIKLSTHTSFSLFECRKVVTSSKSPDSGNGIGLTALLWYTEEYIALDDNKYIGDLLAEFKAAKDRSKGEILHCKLIFKKRLFRESDEAVADPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILAEIGFVRAPETCTDWDSLLERFLPRQIAITRAKREWELDILSRYHSLEHLTKDEARQQFLRILRALPYGNSVFFHVRKIDDPIGLLPGKIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSSGGGSVNGDIANNFKTPNLEIYEKRVQDLTKAVEESQRNADQLLEELREKQMQEEKMQEELEALKESLNADKQNLEEITCDRDRLRSMCNEKDKALQAAMLEKRNMEARLAKLSNMMVENTKKESDRANSEDLNKLEDELKLRKVELLTAEETIKRLSNEKLILEQKLSMLEKKNADEAIYNI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1357 792 Coils Coil 628 690 - -
Sto11g1357 792 Coils Coil 742 783 - -
Sto11g1357 792 Gene3D - 402 503 IPR014352 -
Sto11g1357 792 Coils Coil 698 732 - -
Sto11g1357 792 PANTHER MYOSIN VII, XV 34 605 - -
Sto11g1357 792 ProSiteProfiles FERM domain profile. 279 604 IPR000299 GO:0005856
Sto11g1357 792 SUPERFAMILY PH domain-like 510 598 - -
Sto11g1357 792 SMART B41_5 275 510 IPR019749 -
Sto11g1357 792 MobiDBLite consensus disorder prediction 1 23 - -
Sto11g1357 792 SMART MyTH4_1 115 274 IPR000857 GO:0005856
Sto11g1357 792 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Sto11g1357 792 Gene3D - 278 393 - -
Sto11g1357 792 PANTHER MYOSIN-VIIA-LIKE PROTEIN 34 605 - -
Sto11g1357 792 Pfam FERM central domain 396 510 IPR019748 -
Sto11g1357 792 SUPERFAMILY Second domain of FERM 388 505 IPR035963 -
Sto11g1357 792 CDD FERM_B-lobe 405 503 IPR019748 -
Sto11g1357 792 Gene3D MyTH4 domain 94 276 IPR038185 -
Sto11g1357 792 Gene3D - 508 615 IPR011993 -
Sto11g1357 792 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856
Sto11g1357 792 CDD FERM_C_KCBP 507 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1357 Sto-Chr11 13134309 13139218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1357 30 779 Calmodulin-binding Proteins AT5G65930 72.500 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1357 - - adu:107475586 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1357 11 13134309 13139218 Sto11g1357 11 13134309 13139218 ECH