Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1348 ATGAATAGCATCGACGACGATAATTCCAGGCAAGATCTGGACCCTCAAAGTGACCACAGTTCCGACTATTTAGCTCACTCTCATCATCCTCATCCTCTTCCTCTCCAATCTCATCCTCAGCCTCAGCCTCAGCCTCAGCCTCGCCGTCCTCGTGGCTTTGCGGCCACAGCTGCCGCTACGGCGGCCGTTACAAGCCCCAATTCTGCTGGAAAGGGcaagaaagagagggaaaaggAGAAGGAGCGTACCAAGCTCCGAGAACGCCACCGACGAGCGATCACCAGTCGTATGCTTGCTGGACTCCGTCAGTATGGCAATTTCCCTCTCCCGGCACGTGCCGACATGAATGATGTGCTCGCCGCGCTCGCGCGCGAGGCTGGTTGGGTTGTGGAGGCAGATGGTACCACCTACCGCCAGTGCCCGCCTCCTTCTCAAATGGCATCATTTGCTGCAAAGTCAGTTGAAAGTCCACTCTCTGCTGGTTCTTTAAGAACTTGCTCTGTTAAAGAAACACTAGAGAATCAGCCACCAGTACTTAGAATTGATGAAAACTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCAGAAAGGGACTCCAAGAATGAAAAATATGCAAGTGCAAGCCCCATTAATCCAGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGTGGTGCATGACAGTAATTTTACAGGCACACCTTATGTTCCTGTTTATGTAAAACTTCCAGTTGgtataattaacaaattttgcCAGTTGATTGACCCTCAAATTAGACAGGAGCTAATTCATATGAAGTCTTTAAATATTGATGGTGTTATTGTGGATTGTTGGTGGGGAATTGTTGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGCTATAGGGAACTTTTTAGCATTATTAGAGAAATCAAGTTGAAGTTGCagGTTGTTATGGCTTTTCATGAATGTGGAGGGAATGACTCTAGTGACTCATTGATTGCCCTCCCACAGTGGGTTTTGGAGATTGGAAAAGACAATCAGGATATATTTTTCACAGATCGTGAAGGACGGAGGAATACTGAATGTCTTTCTTTGGGCATTGACAAAGAGCGAGTCCTGAAAGGAAGGACTGGCATTGAGGTCTATTTTGATTTCATGAGAAGCTTTCGAACAGAGTTTGATGACTTGTTTGCAGAAGGCCTTATTTCTGCTGTAGAAATCGGACTTGGAGCATCTGGGGAGCTGAAATATCCTTCATTTTCAGAAAGAATGGGGTGGAGGTACCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATATATGCAACAAAGTCTACGCAGAGCAGCTAAATTACGTGGTCACTCTTTTTGGGCTAGAGGACCTGATAATGCTGGTCAATACAATTCTATGCCACATGAAACTGGATTCTTTTGTGAACGAGGTGATTATGACAGCTATTATGGGCGCTTCTTCTTGCATTGGTATGCCCATGCATTGATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTTGCTTTTGATGAAACACAAATAGTTGTCAAGGTTCCTGCAGTATACTGGTGGTACAAGACTGCTAGTCATGCAGCGGAGTTGACAACAGGATATCACAACCCTACAAACCAGGATGGATATTCCCCTCTTTTTGAGGTTCTGAGAAAACACGCTGTGACCATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAGCTGATGAATCATTGGCTGACCCAGAGGGTTTGAGTTGGCAGGTACTAAACTCTGGCTGGGATCGAGGACTCTTGGTAGCTGGGGAGAATGCACTACCATGTTATGATCGAGAAGGGTTCAGGAGACTAGTCGAGATGTCGAAGCCAAGAAATGATCCTGATCACCGCCACTTCTCATTCTTTGCTTATCAACAACCATCTCTAGTTCAGGGGAATATTTGCTTGTCGGAGTTGGATTCCTTCATCAAATGCATGCATGATTCACCTAGAAGTTGTGAAATTCTACATGGTATCAAAGCACTTGTTTACACAATTATGCTCGTGATCCAAGATTTGCGTATTGATCAAAGAAGATGGGAGATGATAATGGAATCCAAGAAGACTGAAGTTTCTAACGGGCTGCACGGATTCGATCAATCGGGCACGTCTCTTGTCTCTACTATGTTAAACGGAAGAAATTATCTTTCCTGGAACATTGCTGTGAAAACAGCTTGGGAAGCCAAGAAAAAGGTAGGCTTCGTAGATGGAAGCATCAAGCCTCATGAAGATCTAGAGGAATACGCAGAGTGGAAGTCAATAGTTTCTATGATCAAGTCCTGGATAAAGAATTCCATCCAGGAAGAAATAGCAGATACTTACGTTATGCTCTTACCTCCAAAGCTCTATGGGATGTTTTGA 2415 0.4398 MNSIDDDNSRQDLDPQSDHSSDYLAHSHHPHPLPLQSHPQPQPQPQPRRPRGFAATAAATAAVTSPNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSQMASFAAKSVESPLSAGSLRTCSVKETLENQPPVLRIDENLSPASIDSVVIAERDSKNEKYASASPINPVDCLEADQLMQDIHSVVHDSNFTGTPYVPVYVKLPVGIINKFCQLIDPQIRQELIHMKSLNIDGVIVDCWWGIVEGWSPQKYVWSGYRELFSIIREIKLKLQVVMAFHECGGNDSSDSLIALPQWVLEIGKDNQDIFFTDREGRRNTECLSLGIDKERVLKGRTGIEVYFDFMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYMQQSLRRAAKLRGHSFWARGPDNAGQYNSMPHETGFFCERGDYDSYYGRFFLHWYAHALIDHADNVLSLASLAFDETQIVVKVPAVYWWYKTASHAAELTTGYHNPTNQDGYSPLFEVLRKHAVTMKFVCLGFQLSSQEADESLADPEGLSWQVLNSGWDRGLLVAGENALPCYDREGFRRLVEMSKPRNDPDHRHFSFFAYQQPSLVQGNICLSELDSFIKCMHDSPRSCEILHGIKALVYTIMLVIQDLRIDQRRWEMIMESKKTEVSNGLHGFDQSGTSLVSTMLNGRNYLSWNIAVKTAWEAKKKVGFVDGSIKPHEDLEEYAEWKSIVSMIKSWIKNSIQEEIADTYVMLLPPKLYGMF 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1348 804 Pfam Glycosyl hydrolase family 14 247 642 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 Pfam gag-polypeptide of LTR copia-type 714 759 IPR029472 -
Sto11g1348 804 MobiDBLite consensus disorder prediction 7 26 - -
Sto11g1348 804 MobiDBLite consensus disorder prediction 70 87 - -
Sto11g1348 804 Gene3D Glycosidases 231 710 - -
Sto11g1348 804 Pfam BES1/BZR1 plant transcription factor, N-terminal 70 216 IPR008540 -
Sto11g1348 804 PANTHER - 75 667 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 274 288 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 295 313 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 317 338 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 410 432 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 483 502 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 517 533 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 534 545 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 552 575 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 590 612 IPR001554 GO:0000272|GO:0016161
Sto11g1348 804 MobiDBLite consensus disorder prediction 34 48 - -
Sto11g1348 804 MobiDBLite consensus disorder prediction 1 87 - -
Sto11g1348 804 PANTHER BETA-AMYLASE 8 75 667 - -
Sto11g1348 804 SUPERFAMILY (Trans)glycosidases 235 675 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1348 Sto-Chr11 13013508 13024199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1348 30 669 Glycoside Hydrolase AT5G45300 65.865 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Sto11g1348 Glyco_hydro_14 6.3e-88 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1348 K01177 - gmx:100777004 1137.09