Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1336 ATGTCTTCTCATAGTCACACCCTTCCTCTgttcttcttttccttcttcttcttcttcgttctCTCATCTTCTTCAATTCACTTCCAAATCCCTCGTTTCGATCCTAACGACCCCACCATCCTATATCGTGGAGATGCAGTACCTCGTGTAGGAGCAGCCGAATTAAACAACAGAATCACATATTCATTTCAAGTTGGATCGATAATCTATTCCAAAGACATACAAATCTGGGATTCCGCTTCAGGAAAACTCACAGATTTCACAACCCACTTCACCTTCTTCATTGACACTCTAAATGCTTCCAAATATGCTGCTGGACTTGCCTTCTTCCTCGCACCTTCTGGTTTCCAAATCCCTCCCAATTCAGCTGGTGGATTCCTAGGCTTATTCAACACTACCACTAGTGATTCTTCTCAGAACCACATtgttcttgttgaatttgataCCTTTGAAAATGTTGAGTGGGACCCTCTTGGTGTAGGTGGTCATGTGGGTATCAACATCAATGCAGTATCTTCTTCAGTGTATACTCCATGGAATGCTAGCCTTCATAGTGGTGAAACTGCTGATGTGTGGATTACTTACAAGGCAAGTACTAAGAATCTAAGTGTTTCATGGAAATACAGAACATCCTCTGTTTCTGAACAGAACACTACTCTGTCTTATACCATTGATTTGATCAAAGTATTGCCTCAATGGGTCACCGTTGGATTCTCTGCTGCAACAGCTAGTTATGTAGAACGACATGTGATTCAATCATGGGAGTTCAATTCCACTTTGGACATGACAAATGTTACTACTACTCAAAGTGGAAAGGACACAAAACAGAAGACAACATTAGTGGTGAGTTTGTCAATTGTAGGGGTTGTTTTGATCCTAGGAGGGGTTACATTTACAGCATGTGCAATATTGAGAAGGAGAAAAAGGGGATCTAGAGAAAGGAAAAGCTTAACATCTATAGATGATGATGATCTTGAAAGAGGAGCAGGGCCTAGAAGGCACAAGATAGCTACTGGATTGGCCTCAGCTGTGCTATATCTTCATGAAGAATGTGAACAATGTGTAGTTCATAGAGATATCAAACCAAGCAATGTGATGCTAGATTCAAGTTTTAATGTCAAGCTTGGTGATTTCGGGCTAGCGAAGCTTATGGACCACGAATTAGGCCACGAAACGACGGGATTAGCTGGAActcttgcttacatggcacctGAATATGTAAGTACGCGCAGGGCTAGTAAGGAATCAGATGTGTATAGTTTTGGGATAGTGGTGTTGGAGATTGCCACAGGAAGGAAAGCTATGAAATTTGTGGAGGATAAGGATGGAGAAAAGGGTTTGGTGAAGTGGGTATGGGATCACTATGGGAGAGAAGAAGTGGTTATGGCAGTGGATGAGAGATTGGGAAGAGATTATAATGAGAAAGAAGTGGAGTGTTTGATGGTTTTGGGGTTGTGGTGTTGTCATCCTGATCAAAACTTGAGGCCATCAATGAGACAAGCAATTCAAGTGCTTAATTTTGAGGCCAATTTACCTCATATTCCAAAAAATATGCCTATTCCTAAGTATGATTTTCCTACTTCATCAGAAACCTCACAAGCTTTGTTAAGTGAAACCATACAAGTGGGTCGTTAG 1635 0.3963 MSSHSHTLPLFFFSFFFFFVLSSSSIHFQIPRFDPNDPTILYRGDAVPRVGAAELNNRITYSFQVGSIIYSKDIQIWDSASGKLTDFTTHFTFFIDTLNASKYAAGLAFFLAPSGFQIPPNSAGGFLGLFNTTTSDSSQNHIVLVEFDTFENVEWDPLGVGGHVGININAVSSSVYTPWNASLHSGETADVWITYKASTKNLSVSWKYRTSSVSEQNTTLSYTIDLIKVLPQWVTVGFSAATASYVERHVIQSWEFNSTLDMTNVTTTQSGKDTKQKTTLVVSLSIVGVVLILGGVTFTACAILRRRKRGSRERKSLTSIDDDDLERGAGPRRHKIATGLASAVLYLHEECEQCVVHRDIKPSNVMLDSSFNVKLGDFGLAKLMDHELGHETTGLAGTLAYMAPEYVSTRRASKESDVYSFGIVVLEIATGRKAMKFVEDKDGEKGLVKWVWDHYGREEVVMAVDERLGRDYNEKEVECLMVLGLWCCHPDQNLRPSMRQAIQVLNFEANLPHIPKNMPIPKYDFPTSSETSQALLSETIQVGR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1336 544 CDD lectin_legume_LecRK_Arcelin_ConA 26 260 IPR001220 GO:0030246
Sto11g1336 544 PANTHER - 19 333 - -
Sto11g1336 544 PANTHER - 333 532 - -
Sto11g1336 544 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 264 IPR013320 -
Sto11g1336 544 Pfam Legume lectin domain 26 265 IPR001220 GO:0030246
Sto11g1336 544 PANTHER PUTATIVE-RELATED 333 532 - -
Sto11g1336 544 PANTHER PUTATIVE-RELATED 19 333 - -
Sto11g1336 544 SMART serkin_6 281 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1336 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Sto11g1336 544 ProSiteProfiles Protein kinase domain profile. 177 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1336 544 Gene3D - 23 272 - -
Sto11g1336 544 Gene3D Transferase(Phosphotransferase) domain 1 318 527 - -
Sto11g1336 544 Pfam Protein kinase domain 334 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1336 544 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Sto11g1336 544 SUPERFAMILY Protein kinase-like (PK-like) 332 529 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1336 Sto-Chr11 12942377 12944347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1336 333 523 Receptor kinase-like Gene Family AT5G10530 65.816 3.63e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto11g1336 Lectin_legB 3.4e-67 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1336 - - zju:107425082 431.409