Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1306 ATGATAGAGAGGGACACAATGACCAAAACCACCTCAAAAACTGGTCTTAAATTAACCAAACTCCAAGGTCACATCCAATTCAAAGATGTTTCTTTCACTTACCCCTCTCGTCCTGATGTACTCATCTTCAACAACCTCAACATCCACATTCCTCCAGCCAAAGTCCTAGCTCTTGTTGGAGCAAGTGGTTCAGGGAAGAGCACTGTCATATCTCTTATCGAGCGCTTCTATGAACCCACTTCTGGACAAATCCTGTTAGATGGCAATAACATCAAGGATCTTGATCTCAAGTGGCTAAGACAGCAAATTGGGTTGGTTAATCAAGAACCTGCCCTGTTTGCTACAAGCATTAGAGAGAACATTTTGTATGGAAAAGATGATGCCACGTTGGAAGAACTTAAACGAGCTGTGAAGCTTTCGGATGCTCATTCTTTCATCAATAACCTTCCTGATAGGTTGGAAACTCAGGTTGGTGAGAGAGGGATTCAACTATCAGGTGGACAAAAGCAGAGAATAGCCATATCTAGAGCTATAGTGAAGAATCCATCGATTCTGCTTTTGGATGAAGCGACAAGTGCTCTTGATGCAGAGTCAGAGAAGAGTGTACAGGAGGCTCTTGATCGTGTGATGGTTGGTAGGACTACAGTGATTGTAGCACACAGGCTTTCTACGATTAGAAATGCGGATGTGATTGCTGTTGTTGAAGGAGGTAACATTGTGGAAACTGGCAGCCATGAGGAGCTCATAGCTAATCCAAATACTGCTTATGCCTCTCTTGTTCAACTCCAAGAGTCTGCTTCTTTCCAAACACACCCTTCCCTGGCTCCTACCTTGgatggtAGTGTGAGGTACTCGAGAGAACTAAGTCGTACAACAACAACAAGCGTTGGTGGTAGTTTTCGATCAGATAAAGAATCCCTTGGTCGTGTTGGTGCTGAAGAAGCGGAAAACGGTGGGAAGTCAAGACATGTTTCTGCAAGAAGGTTATATTCCATGGTTGGAGCTGACTGGTATTACGGGGTTTCTGGGACGTTTTGTGCATTTATTGCTGGAGCCCAAATGCCACTTTTTGCTCTTGGAATCTCTCACGCTCTTGTATCCTATTACATGGGCTGGGATACAACCCGTCATGAGATAAATAAAGTTGCTTTCCTTTTCTGCGGTGGAGCTGTTATAACTGTCATCGTCCATGCCATTGAACACCTTTCTTTTGGAATCATGGGCGAACGACTTACTCTTCGCGTTAGAGAATTGATGTTTTCtgCTATTTTGAAGAATGAAATTGGGTGGTTTGATGATATAAACAACACAAGTTCTTCGCTTTCGTCACAACTAGAGACTGATGCAACTTTGTTACGAACTATAGTTGTTGATCGCTCAACAATTCTCTTACAGAATATCGGTCTGGTTGTTGCTTCATTTATTATTGCTTTCCTCTTGAACTGGAGGATAACACTTGTTGTGTTGGCCACATATCCTTTGGTCATAAGTGGTCACATTAGTGAGAAACTTTTCATGCAAGGATATGGAGGGAACTTGAGCAAAGCATATCAAAAGGCCAACATGCTAGCAGGGGAGGCTGTGAGTAACATACGAACTGTTGCTGCATTTTGTTCGGAAGAAAAAGTGATTGAACTTTATGCGAACGAGCTCGTTGATCCTTCCAAGCGTTCATTCAAAAGGGGCCAAATTGCAGGCCTATTCTATGGCATTTCCCAGTTCTTTATTTTCTCGTCTTATGGGCTTGCTTTGTATGGTTCTGTGTTGATGGAAAAGGACCTAGCGAGCTTTAAGTCAATAATGAAGTCATTTATGGTTTTAATAGTGACAGCATTGGGTATGGGGGAGACATTGGCTCTGGCTCCAGACATTCTAAAAGGGAACCAAATGGTGGCATCGGTGTTTGATGTGTTGGATCGAAAGTCAGGAGTAGTGAGTGATAGTGGAGAAGAGCTAAAGAGTGTGGAGGGAAGTATTGAGCTTAAGCGTATTGATTTCAGCTACCCTTCTAGGCCAGATGTGGTCATTTTTAAGGATTTCACTCTCAGAGTGCCTTCAGGAACAAGTGTTGCTTTAGTGGGCCAAAGTGGTTCTGGTAAAAGCTCTGTCATCTCACTTATACTCAGGTTTTATGATCCAACTTCAGGGAAGGTCATGATTGATGGAAAAGATATAAGGAAAGTGAATCTGAAGTCACTGAGGAAACACATAGGTTTTGTGCAACAAGAGCCAGCTCTGTTTGCAACTTCAATATATGAAAACATTCTGTATGGAAAAGAAGGAGGGTGTGAATCAGAAGTGATAGAAGCAGCGAAGCTTGCGAATGCACACAGCTTCATAAGTGGTCTTCCAGATGGGTACTCCACAAAAGTGGGAGAGAGAGGAGTTCAACTATCTGGAGGACAAAGACAAAGGGTAGCCATAGCCAGAGCCATACTGAAGAACCCAGAAATCTTGCTTCTTGATGAAGCCACAAGTGCACTGGATGTGGAATCAGAGCGTGTGGTTCAACAAGCACTGGACAGGTTAATGCAGAATAGAACCACAGTGATGGTGGCACATAGGCTATCCACTATAAGAAATGCAGATGAAATCTCAGTTTTGCAAGATGGCAAGATTGTAGAACAAGGCACTCATTCAAGTCTAATACAAAACACAAATGGAGCATACTTTAAATTGGTCAATCTTCAACAACAGAAAGCATCGcaataa 2712 0.4255 MIERDTMTKTTSKTGLKLTKLQGHIQFKDVSFTYPSRPDVLIFNNLNIHIPPAKVLALVGASGSGKSTVISLIERFYEPTSGQILLDGNNIKDLDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEELKRAVKLSDAHSFINNLPDRLETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADVIAVVEGGNIVETGSHEELIANPNTAYASLVQLQESASFQTHPSLAPTLDGSVRYSRELSRTTTTSVGGSFRSDKESLGRVGAEEAENGGKSRHVSARRLYSMVGADWYYGVSGTFCAFIAGAQMPLFALGISHALVSYYMGWDTTRHEINKVAFLFCGGAVITVIVHAIEHLSFGIMGERLTLRVRELMFSAILKNEIGWFDDINNTSSSLSSQLETDATLLRTIVVDRSTILLQNIGLVVASFIIAFLLNWRITLVVLATYPLVISGHISEKLFMQGYGGNLSKAYQKANMLAGEAVSNIRTVAAFCSEEKVIELYANELVDPSKRSFKRGQIAGLFYGISQFFIFSSYGLALYGSVLMEKDLASFKSIMKSFMVLIVTALGMGETLALAPDILKGNQMVASVFDVLDRKSGVVSDSGEELKSVEGSIELKRIDFSYPSRPDVVIFKDFTLRVPSGTSVALVGQSGSGKSSVISLILRFYDPTSGKVMIDGKDIRKVNLKSLRKHIGFVQQEPALFATSIYENILYGKEGGCESEVIEAAKLANAHSFISGLPDGYSTKVGERGVQLSGGQRQRVAIARAILKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVMVAHRLSTIRNADEISVLQDGKIVEQGTHSSLIQNTNGAYFKLVNLQQQKASQ 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1306 903 SMART AAA_5 52 238 IPR003593 -
Sto11g1306 903 SMART AAA_5 686 872 IPR003593 -
Sto11g1306 903 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524
Sto11g1306 903 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 659 895 IPR003439 GO:0005524
Sto11g1306 903 ProSitePatterns ABC transporters family signature. 798 812 IPR017871 GO:0005524
Sto11g1306 903 CDD ABC_6TM_Pgp_ABCB1_D2_like 330 642 - -
Sto11g1306 903 Gene3D ABC transporter type 1, transmembrane domain 304 649 IPR036640 GO:0005524|GO:0016021
Sto11g1306 903 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 343 626 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto11g1306 903 CDD ABC_MTABC3_MDL1_MDL2 25 263 - -
Sto11g1306 903 Pfam ABC transporter 44 192 IPR003439 GO:0005524
Sto11g1306 903 Pfam ABC transporter 678 826 IPR003439 GO:0005524
Sto11g1306 903 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 899 - -
Sto11g1306 903 CDD ABC_MTABC3_MDL1_MDL2 659 897 - -
Sto11g1306 903 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 899 IPR039421 -
Sto11g1306 903 SUPERFAMILY ABC transporter transmembrane region 327 640 IPR036640 GO:0005524|GO:0016021
Sto11g1306 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 897 IPR027417 -
Sto11g1306 903 Pfam ABC transporter transmembrane region 343 612 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto11g1306 903 Gene3D - 650 903 IPR027417 -
Sto11g1306 903 Gene3D - 15 271 IPR027417 -
Sto11g1306 903 MobiDBLite consensus disorder prediction 293 317 - -
Sto11g1306 903 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 261 IPR003439 GO:0005524
Sto11g1306 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 263 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1306 Sto-Chr11 12702463 12707869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1306 1 903 Calmodulin-binding Proteins AT2G36910 50.642 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1306 K05658 - gmx:100819045 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1306 11 12702463 12707869 Sto11g1306 11 12702463 12707869 ECH