Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1302 TTGGTGAGAAAGAGAAGGCACCAGCAAGCTCTAAGGCTTTCCTTACCATCGCCATCATCATCACCTCCAAGAATCACCCCACCTCATGATTTCTGcttcaaaacccaaatcccatcATCCTCTTATAATTATGTCGACTCTCTGGCCATCAAGAACCTCTCAAGCCTCAAGAAACTCTCTGTTCTTGGCCATGGCAATAATGGCACCACAGTCTACAAAGTCCATCACAAGAAGAACCAATCCTTCTATGCCTTGAAAGTCCTCAGGTTCAACCACAATGCTCTTGAAATCTCTCACCAGGCTAAACTTGAGGCTGAGATTCTCAAAAGAGTGGATTCCCCTTACATTGTAAGATGCCATGCAGTTTTTGACAACACTTGCTGTGATTCCCATGAAGATGGAGGGGACCTTAGGTTCGTTATGGAATACATGGAAGGAGGGTCACTTCATGATGTGTTGAGACAACACAAAGGTGGATTACCAGAGGAAGTGATCTCTGTGTTGGCCAAAAGGGTCTTACAAGGGCTTAACTATTTACATGGAATGCACATAGTGCATAGAGACATAAAGCCTTCAAATTTGCTAGTGAATGAGAAAGGGGAGGTGAAGATTGCAGATTTTGGAGTGAGCCATGTAGTGGAAGGTAGATTTGATGAGGCATGTGACTCTAATGTAGGGACATGTGCCTACATGAGTCCTGAAAGAGTGGATCCTGAGAGGTGGGATGGTGAATATGCAGATGGGTTTGCTGGGGATGTGTGGTCTGTGGGAATGGTGATGTTGGAATGTTTTTTGGGATATTTTCCATTGATGAGTGATGAAGGGCAGAAACTGGATTGGGCCACATTGATGTGTGCAATTTGCTTCAGTGAGAAGGTGGAGATGCCAGAGAAGGCATCGTTGGAATTCAAACACTTTGTTCAGAGGTGTTTAGAGAAGGATTGGAGGAAAAGAGCTACTATCACTGAACTTCTTGATCATCCTTTTGTGAATAGGAAGTGGTGCACTTCTAGTGAAGGGTTGGTTAATTACCTTCTCCATGGTTGA 1047 0.4327 LVRKRRHQQALRLSLPSPSSSPPRITPPHDFCFKTQIPSSSYNYVDSLAIKNLSSLKKLSVLGHGNNGTTVYKVHHKKNQSFYALKVLRFNHNALEISHQAKLEAEILKRVDSPYIVRCHAVFDNTCCDSHEDGGDLRFVMEYMEGGSLHDVLRQHKGGLPEEVISVLAKRVLQGLNYLHGMHIVHRDIKPSNLLVNEKGEVKIADFGVSHVVEGRFDEACDSNVGTCAYMSPERVDPERWDGEYADGFAGDVWSVGMVMLECFLGYFPLMSDEGQKLDWATLMCAICFSEKVEMPEKASLEFKHFVQRCLEKDWRKRATITELLDHPFVNRKWCTSSEGLVNYLLHG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1302 348 CDD PKc_MAPKK_plant_like 54 331 - -
Sto11g1302 348 Pfam Protein kinase domain 57 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1302 348 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 333 IPR045269 GO:0004674|GO:0006914
Sto11g1302 348 SMART serkin_6 56 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1302 348 Gene3D Transferase(Phosphotransferase) domain 1 50 343 - -
Sto11g1302 348 ProSiteProfiles Protein kinase domain profile. 56 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1302 348 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 3 333 - -
Sto11g1302 348 MobiDBLite consensus disorder prediction 1 24 - -
Sto11g1302 348 SUPERFAMILY Protein kinase-like (PK-like) 55 332 IPR011009 -
Sto11g1302 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1302 Sto-Chr11 12680757 12681803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1302 1 333 MAP Kinase Kinase Gene Family AT1G32320 52.853 1.27e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Sto11g1302 Pkinase 6.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1302 K20604 - gmx:100817973 448.743