Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1294 atggaGCTATTTCCAGCACAGCCAGATTTGTCGTTGCAAATTAGTCCTCCAAGTAATTCTAGTACTAGTACAGAAGAGGCGTTGGATTTGGGGTTCTGGAAGAGAGCTTTAGACAATAGAAACTCCTTATTCCCTAaaactccttTCTCTAACTCCAACTCTAACTCTAACCCAACCACACCTTCTTCAATTAATTCTAATTATCACCACTTCCAAAACGCCCCCTTTCACCACCACAACCACTCACACACGCAAACGCAATACTTGCCGCCACAGAGTTTAACTCAGGAACTGGGCTTTCTGAGGCCCATCAGAGGAATCCCTCTCTACCACCACCTTCCTTCTTCTACGCCCATCCCCATGCCCATGCCCATGCCCTTCCCTCCTCTTCTGGAACCTTCTTCCGTATCATCCAACACTACTGCATCTGCATCTGCAACCACCACtagcaataataataatcataattccAGCCCCTTCACCActttccatcatcatcatcatcatcatagtaACAGCAGCCAAGGTTTGATGAGGTCGAGGTTCTTGTCTCATCGTTTTCCTGCCAAACGCAGCATGAGGGCTCCTCGGATGCGTTGGACTACCACGCTTCACGCCCGCTTTGTTCATGCCGTTGAGCTCTTGGGCGGCcatgaaagggcTACACCAAAATCCGTTCTCGAGCTAATGGATGTCAAGGATCTTACTTTGGCACACGTTAAATCTCATTTGcagATGTATCGGACGGTGAAAACCACAGATAGAGCAGCTGCTTCTCCAGGGCAATCTGATGTATACGATAACGGGTCATCTGGGGATACTTCTGACGAATTAATGTTTGACATGAACAATTCAACAAAGTGCGATCTATCTACTAAGCAAGGAAGACAAAGTGTTAATAATGCAGAAAACGAATATCATCATGGGCTTTGGAGCAACTCTTCCagAGAAGTTTGGTCGCATGGCAAGCCAAAGGTGATTGATTCTCTTGGAAATAATAACGTCACTTGTCTTGAGAAGGAAATGGATCCAAAGAGCCTAAGCTACGAGAGAATATCAGATAGAAGCTCATCTTCAAATCTCTCAGGATCAAGCCCCAAGAAGAAGCCTAATTTGGATTTGGAATTCACATTGGGACAGCCACTTTGA 1149 0.4273 MELFPAQPDLSLQISPPSNSSTSTEEALDLGFWKRALDNRNSLFPKTPFSNSNSNSNPTTPSSINSNYHHFQNAPFHHHNHSHTQTQYLPPQSLTQELGFLRPIRGIPLYHHLPSSTPIPMPMPMPFPPLLEPSSVSSNTTASASATTTSNNNNHNSSPFTTFHHHHHHHSNSSQGLMRSRFLSHRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASPGQSDVYDNGSSGDTSDELMFDMNNSTKCDLSTKQGRQSVNNAENEYHHGLWSNSSREVWSHGKPKVIDSLGNNNVTCLEKEMDPKSLSYERISDRSSSSNLSGSSPKKKPNLDLEFTLGQPL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1294 382 MobiDBLite consensus disorder prediction 132 160 - -
Sto11g1294 382 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 381 - -
Sto11g1294 382 MobiDBLite consensus disorder prediction 124 177 - -
Sto11g1294 382 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 196 249 IPR006447 GO:0003677
Sto11g1294 382 SUPERFAMILY Homeodomain-like 193 249 IPR009057 -
Sto11g1294 382 MobiDBLite consensus disorder prediction 351 367 - -
Sto11g1294 382 MobiDBLite consensus disorder prediction 44 88 - -
Sto11g1294 382 MobiDBLite consensus disorder prediction 1 26 - -
Sto11g1294 382 Pfam Myb-like DNA-binding domain 197 248 IPR001005 -
Sto11g1294 382 MobiDBLite consensus disorder prediction 11 26 - -
Sto11g1294 382 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 381 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sto11g1294 382 MobiDBLite consensus disorder prediction 341 382 - -
Sto11g1294 382 Gene3D - 195 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1294 Sto-Chr11 12628262 12632529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1294 1 381 G2-like Transcription Factor Family AT4G17695 38.861 1.47e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto11g1294 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1294 - - aprc:113868756 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1294 11 12628262 12632529 Sto11g1294 11 12628262 12632529 ECH