Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1282 ATGGGTAGCAGTGAGACGGATAAAactccaaaagaaaaagagcctAAGACACCTCCTGCTACGTCACAGGAGCCGCCTTCCACCACCAGCACTGGAACAATAAATCCTGACTGGTCTAGCTTTCAGGCATATTCTCCTATCCCTCCACATGGGTATTTGGCGTCAAGTCCACAAGCCCACCCGTATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGTACCCCACCACATCCATATGTTGCAATGTATCCCCCGGGTGGCATATATGCTCATCCATCCATACCTCCGGGATCTTATCCTTTTAGTCCTTTTCCCATGCCTGCTTCAAATGGTATTGCTGAGGCTTCAGGAAATACACATGGAAGCTTGGAAGGCGATGCTAGGCCTCTAGAGGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAATTTGATTACAGGGAAGAATAATGAACATGGTAAAACAACGGGAACACCTGCTAATGGAATGCATTCGAAAAGTGGTGAGAGTGCAAGTGAAGATACTAGTGAAGGAAGTGGTGCAAATTCTCAGGATGACTCTGAATTCAGATCAGGGGGCAGGCAGGGTTCTTTGGAAGCTGAACCATCTCAAAATGGAAATTTAGTACGTGCTCCTCAAAATGGGGGACTTAATACGCATCATAGAGTGGTTAATCAAACTATGCCTATCATGCCTATCTCTGCTGCTGGTCCTCCTGGAGCAGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGAATATTGGGGTGCACCAACTTCATCCACCATACCTGCACTACACGGAAAGGTACCTTCTACTGCAGTTGCTGGGGGGATGGTTACAGCCGGATCACGGGATAGTGTTCAGTCACAACCTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGAAAGCAGTCTAATAGGGAATCTGCTCGCAGATCCAGGTTACGCAAGCAGGCTGAATGTGATGAACTAGCTCAGCGAGCTGAGGGTTTGAAAGAAGAAAATGCCACTCTCCGAGCAGAAGTGATTCGAATCAAGAATGAGTATGAGAAATTGCTCTCAGAGAATGCTGCCCTCAAGGGGAGACTGGGGGAACCACCTGGGAATGAAGATCTTAGGTCCGGCCAGGATGATGAAAATGTGGGTGATGAAGCTCAAGAGACTGTGAAGGACGAGGCTGTGCAGGGTGGTCTGACACCAAGACTATCAAAGCTGACTAATTACAGGACTCAGCCTTTAAAATGTCCTCAGTATACTAAACAAGGACAACTAAATGCCTGTTTTGCACGGGCTCTAACTTCTTCAGGGTCAACTTTAGATGGGGGACGCACCACAAAATCCAAGGGTGTTGCTTCTGGCCTTGTTGTGAGCTGCCTGGAAGAGGATTGTCCAGACTTGCGCCTGCATCACAATTCAAAACATCCAAAAGATGCATTAGTGATTACTCACTCCACCGTCCACACTGATCTACCAGATGTGCATACAAAAGCCACTTAA 1530 0.4634 MGSSETDKTPKEKEPKTPPATSQEPPSTTSTGTINPDWSSFQAYSPIPPHGYLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFPMPASNGIAEASGNTHGSLEGDARPLEVKEKLPIKRSKGSLGSLNLITGKNNEHGKTTGTPANGMHSKSGESASEDTSEGSGANSQDDSEFRSGGRQGSLEAEPSQNGNLVRAPQNGGLNTHHRVVNQTMPIMPISAAGPPGAVPGPTTNLNIGMEYWGAPTSSTIPALHGKVPSTAVAGGMVTAGSRDSVQSQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEGLKEENATLRAEVIRIKNEYEKLLSENAALKGRLGEPPGNEDLRSGQDDENVGDEAQETVKDEAVQGGLTPRLSKLTNYRTQPLKCPQYTKQGQLNACFARALTSSGSTLDGGRTTKSKGVASGLVVSCLEEDCPDLRLHHNSKHPKDALVITHSTVHTDLPDVHTKAT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1282 509 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700|GO:0006355
Sto11g1282 509 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700|GO:0006355
Sto11g1282 509 MobiDBLite consensus disorder prediction 291 328 - -
Sto11g1282 509 MobiDBLite consensus disorder prediction 1 42 - -
Sto11g1282 509 SMART brlzneu 305 369 IPR004827 GO:0003700|GO:0006355
Sto11g1282 509 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Sto11g1282 509 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 407 - -
Sto11g1282 509 MobiDBLite consensus disorder prediction 113 226 - -
Sto11g1282 509 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700|GO:0006355
Sto11g1282 509 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 407 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sto11g1282 509 MobiDBLite consensus disorder prediction 371 393 - -
Sto11g1282 509 MobiDBLite consensus disorder prediction 1 18 - -
Sto11g1282 509 MobiDBLite consensus disorder prediction 127 141 - -
Sto11g1282 509 Pfam Disordered region downstream of MFMR 135 272 - -
Sto11g1282 509 MobiDBLite consensus disorder prediction 23 42 - -
Sto11g1282 509 MobiDBLite consensus disorder prediction 146 226 - -
Sto11g1282 509 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700|GO:0006355
Sto11g1282 509 Gene3D - 308 363 - -
Sto11g1282 509 Coils Coil 325 373 - -
Sto11g1282 509 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1282 Sto-Chr11 12530235 12540290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1282 1 374 bZIP Transcription Factor Family AT2G35530 66.404 1.97e-167 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto11g1282 MFMR_assoc 8.8e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1282 K09060 - gmx:778122 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1282 11 12530235 12540290 Sto11g1282 11 12530235 12540290 ECH