Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1261 ATGATGGAGAGGAGTTATGAAGAAGGGAATTATGGATACGAGAATGGGGTTGTGATGACCAGAGATCCCAAACCTAGGCTCAGATGGACGGCTGATCTTCACGATCGCTTTGTCGACGCCGTCACAAAGCTTGGTGGCCCCGACAAAGCCACTCCCAAGTCCGTATTGAGGCTAATGGGCTTGAAAGGTTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCAAAAACAAAATACCAAAGAACAACACAAAGAGAGCAACAATAgaGGTTCATATGTACATTTCAGTAATTGTTCTTCCGGGCCTAACACCAGTTACAGAGCTAATAACCAAACGGAGGAAATTCCAATAGCGGAGGCGTTGAGGCGTCAAATTGAAGTTCAAACGCGATTGGAAGAGCAGCTCGAGgtacaGAAGAAATTGCAGATGAGAGTAGAGGCTCAAGGGAAGTACTTGCAAGCCATGTTGGAGAAAGCCCAAAAGAGCCTCTCTTTGGACATGAATGGACCAAGTAGCCTAGAAACAGCAAGAGTTCAATTGACAGACTTCAACTCTGCATTATCTAATTTCATGGAGAATATGAACAGAGACACCAAAGAAAACATAATGGGCATGAATGATTTCTACAAGAAGACACATGATAATTCAACGGCTTTTGGAATTTATggaggagaggaggaagatCATAAGGATGAAAAACCTAAGGTTGAAGAGAGCTCAATACAATTTGACTTAAACATAAAAGATAACTATGACTTTGTACCTGTAAGTGCTGCTGAAATGGATTCCAAGATGCTTTCATGCAGAGtgtaa 837 0.4026 MMERSYEEGNYGYENGVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQAQKQNTKEQHKESNNRGSYVHFSNCSSGPNTSYRANNQTEEIPIAEALRRQIEVQTRLEEQLEVQKKLQMRVEAQGKYLQAMLEKAQKSLSLDMNGPSSLETARVQLTDFNSALSNFMENMNRDTKENIMGMNDFYKKTHDNSTAFGIYGGEEEDHKDEKPKVEESSIQFDLNIKDNYDFVPVSAAEMDSKMLSCRV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1261 278 MobiDBLite consensus disorder prediction 97 116 - -
Sto11g1261 278 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
Sto11g1261 278 Coils Coil 126 146 - -
Sto11g1261 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 262 IPR044848 GO:0003700
Sto11g1261 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Sto11g1261 278 Gene3D - 23 81 - -
Sto11g1261 278 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
Sto11g1261 278 MobiDBLite consensus disorder prediction 83 116 - -
Sto11g1261 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 262 - -
Sto11g1261 278 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Sto11g1261 278 Pfam MYB-CC type transfactor, LHEQLE motif 124 170 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1261 Sto-Chr11 12381722 12383605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1261 6 191 G2-like Transcription Factor Family AT4G13640 52.083 2.65e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto11g1261 Myb_DNA-binding 2.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1261 - - gmx:100819756 364.77