Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1254 ATGTTTACATGCATAGCGTGTACGAAGCAATTGGCTGAGGAGAGGGATGTTGAAGGAGGAGCCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGATATGGCACTGAAGTTTTCAGGTGCCTATAAGCAATGCAAACCGTGCACTGGATCCGGTAGTTATAAGAAAGGGCAGAGACCTTATCCAGATTTTGATAACATCTCAGAAGGAGTTCCATACCCTTATATGGGAGGGGCTAGCTCAAATTCGACCCCGGCATGGGACTTTACCACCTCCAATTACCCATCTGGTAGATCCGACCCAAGATTTGCTGGGCCATTCGGTGGTGATCGAACCCCCCGAGGACATGAATCAGCATCAGTCTGTGATGTAGTGTTAGAGAACCAGGAAGAGCCCAAGGAGTGGATGGCACAGGTGGAACCAGGGGTTCACATTACATTTGTGTCTCTTCCCAATGGAGGAAATGATCTCAAAAGAATACGTTTCAGCCGGGAGATGTTCAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGATCGAATCTTGGAGCTCTATAATGTCCAGAGATTCAATCGACAAGCTCTTACCACGCCTCCAAGATCTGAAGATGAGCAAAGAGATTCGTCTTACTCAAGACTAGGATCTGCAAGAGAGAGCCCCATGGCTTCATCGTTAAACAAGGAGTGGACACCCAGGAACTACCCTAAAACCACAGGAAATAAAGGTAGTGGCCCCCAATTCCATGGAGGGTCTTCGTTGGAAGCATCACGGACAACAACCTCTTCTAGAGATGAGCCTTCTATTAGTAATGCCAGTGACGTGGAGACAGAATGGGTAGAGCAAGATGAGCCTGGAGTGTACATTACAATCAGACAGTTAGCGGATGGCACTAGGGAGCTTCGACGTGTCAGATTCAGCCGTGAAAGATTTGGGGAGGTACATGCCAAGAATTGGTGGGAGGAGAACCGAGAAAGAATACAAGCTCAATATCTTTGA 1029 0.4781 MFTCIACTKQLAEERDVEGGARESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSGSYKKGQRPYPDFDNISEGVPYPYMGGASSNSTPAWDFTTSNYPSGRSDPRFAGPFGGDRTPRGHESASVCDVVLENQEEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRILELYNVQRFNRQALTTPPRSEDEQRDSSYSRLGSARESPMASSLNKEWTPRNYPKTTGNKGSGPQFHGGSSLEASRTTTSSRDEPSISNASDVETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVHAKNWWEENRERIQAQYL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1254 342 MobiDBLite consensus disorder prediction 206 288 - -
Sto11g1254 342 MobiDBLite consensus disorder prediction 223 286 - -
Sto11g1254 342 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Sto11g1254 342 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 342 IPR044532 -
Sto11g1254 342 Pfam Transcription factor regulating root and shoot growth via Pin3 286 341 IPR013591 -
Sto11g1254 342 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Sto11g1254 342 Pfam Transcription factor BRX N-terminal domain 23 57 IPR027988 -
Sto11g1254 342 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 342 - -
Sto11g1254 342 ProSiteProfiles BRX domain profile. 287 342 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1254 Sto-Chr11 12319881 12324588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1254 1 342 Major Intrinsic Protein MIP AT1G31880 67.877 3.18e-166 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1254 - - ccaj:109789470 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1254 11 12319881 12324588 Sto11g1254 11 12319881 12324588 ECH