Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1253 ATGATCAGCACATGGTATGTAATGTTAGCTACTTCTGAGACTGGTGCTGCATCTTTAGTGCACTTTTGCAAgTACATTCTTGAATCTTGTGCATGCTTAAAACTTTTCTGGTTTGTTGAACTCAGGTACAAGTTAATCAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTCTAAATAAGCAAACTGGTGAAGTTGTTGCTatcaagaaaatgaaaaagaaatattactCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTGCGGAAAATGAATCATCCCAATATTGTCAAGCTGAAGGAAGTTATTCGTGAGAGTGATATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTCATGAAAGACAGGGTAAAGCTGTTTTCTGAATGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCATCAGCGTGGATACTTCCATCGCGACCTGAAACCAGAAAACTTGTTGGTCTCCAAGGATATCATAAAAATTGCCGATTTTGGTCTTGCCCGTGAGATCAGTTCACAACCGCCCTACACTGAGTATGTCTCCACACGGTATCGTGCACCTGAAGTATTGCTTCAATCTTACTCTTATAGCTCCAAAGTTGACATGTGGGCGATGGGTGCTATAATGGCTGAACTGTTCACACTCCGTCCTCTTTTTCCGGGTGTCAATGAAGCAGATGAGATCTACAAAATATGTGGTGTGATAGGCAGTCCAAACATTGAATCATGGTCTGATGGGCTTAAACTTGCAAGGGATATTAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGTGCTGATCCCATCTGTGAGCGCTGATGCGATTAGCCTTATTACCTCACTTTGTTCTTGGGATCCTTGCAAGAGGCCTACAGCTGCTGAGGCCCTCCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCACCAAAGCAGTAGCTAGAACTCCTCCATCTGCAGGAACAAGGGGATCGCTGGATCGGCAAGCGATTAAGAAATATTCTGGCGCTTTGCCTAATTCAAAGCTCACCAATAATTATTCCTCCCCAAAGTTACATCCTCCAATATCTGCAGGTGTACATCGCAAGCTGGATATGGCAAATGAGGATGGAAATAAGACTGATAAGTCTTTGAAGACTaccaaacaaacaaaatatcgaCCACCGGGAAAGGACAGCCCAGCTTGTATAAACAAGGGAAGGACTAATGCACGTGGCGTTTCAGAGACAGCAGAGAAGATGGCTAATATGACAGTAAGTAGTCGAAGACATTCAATGGGAATGGGCCAAGCCCGTCCACCTCCAATGAAAGCTGGAGGTGGAGGGCATTGTATGAGTGAATCTAGAAACTTTCTGATGAGGCCTGCTCAAGAGATTCCACCTGCAAGAGCTTACTCAAGAAAAGTTGCGGGTTGA 1485 0.4256 MISTWYVMLATSETGAASLVHFCKYILESCACLKLFWFVELRYKLIKEVGDGTFGSVWRALNKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDRVKLFSECEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDIIKIADFGLAREISSQPPYTEYVSTRYRAPEVLLQSYSYSSKVDMWAMGAIMAELFTLRPLFPGVNEADEIYKICGVIGSPNIESWSDGLKLARDINYQFPQLAGVHLSVLIPSVSADAISLITSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTKAVARTPPSAGTRGSLDRQAIKKYSGALPNSKLTNNYSSPKLHPPISAGVHRKLDMANEDGNKTDKSLKTTKQTKYRPPGKDSPACINKGRTNARGVSETAEKMANMTVSSRRHSMGMGQARPPPMKAGGGGHCMSESRNFLMRPAQEIPPARAYSRKVAG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1253 494 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 42 467 - -
Sto11g1253 494 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
Sto11g1253 494 Pfam Protein kinase domain 43 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1253 494 PANTHER - 42 467 - -
Sto11g1253 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Sto11g1253 494 Gene3D Phosphorylase Kinase; domain 1 41 122 - -
Sto11g1253 494 SMART serkin_6 43 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1253 494 MobiDBLite consensus disorder prediction 391 431 - -
Sto11g1253 494 Gene3D Transferase(Phosphotransferase) domain 1 123 328 - -
Sto11g1253 494 ProSiteProfiles Protein kinase domain profile. 43 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1253 494 MobiDBLite consensus disorder prediction 445 466 - -
Sto11g1253 494 MobiDBLite consensus disorder prediction 391 409 - -
Sto11g1253 494 CDD STKc_MAK_like 43 321 - -
Sto11g1253 494 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1253 Sto-Chr11 12313743 12318642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1253 42 328 Core Cell Cycle Gene Families AT3G48750 36.824 9.96e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Sto11g1253 Pkinase 7.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1253 K08829 - gmx:100810150 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1253 11 12313743 12318642 Sto11g1253 11 12313743 12318642 ECH