Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1244 ATGGCTTTCATACCTTCTTTGTTCTTGCTGTTTGTACTACTTGCTAATGAAGTTACAGCTCAAAAAAACCATTCCCACATCATAAAACTGGGTTCTCGTCTCTCCCCAAAAGCAAACTCTACTTCATGGTTCTCAGCCTCTGGTCTTTTTGCCTTCGGCTTTTATCAACAAGGTAATGGCTTTGCTATTGGGATATGGCTCATTGGTAAACCAGATAACACAATTGTCTGGACAGCTAACCGTGACATGCCACCACTTTCCTCTGATTCCATTTTGGAATTAAATAAAACTGGTTTGCTCCTTCATTCTGAGAATGGGAATCAAGAACTCGTTACTGATTTCAGTGATTTGGCAGCTTCAGCATCTATGCTTGATTCTGGTAATTTTGTGCTTTATGGTAACAATTCTGATGTTCTCTGGCAAAGCTTTGATTACCCTACTGACACCATATTAGGAAATCAAAGTTTATTTTATGAACTGGTCTCTGGTATGTCCAAATCAGATCACTCAAGTGGACATTTTACTCTCAACATGCAGAATGATGGAAATCTTGTTGCTTACCCTGTAAACAGCTCAAAGTGGCCACAAGATGCTTATTGGGCCTCAGAGACCTCTGGTGCAATGTTTTCACAACTCCGTCTTAACCTTGAAGGCTTTCTTTGCCTATGGAAATATGGGAATTCCTTTTGTCTTGTTGTGGCCAATAGCACCTATCTTGGAAAGAATACAACCATAGTCTACCGTGCAACACTCGATGAAGATGGGATTTTTAGGTTGTACGAGCACCAAATCAGGAAGAATAATGGCTCAGTAAATCAAACTGTTGTGTGGAGTTCTTTGCCTAGCCAATGTGATGTCAAGGGTTTTTGTGGCCTCAACAGTTATTGCTCTACTCTCAATGGCCATGCTGTGTGTCAGTGTTATCCCGGATTCTTGCCACGCAAACAAAGTAACATGTTCCTAGACTGCAAACAGAATTACAGCAAAGATTTTTGTGAAACCAGTGCAGATAAAGTGGTGCCCTACAATGTTACTTACTTGCAAGAAGAGATCGGTAGAGGATCTTCTGGAGCAGTTTATCGAGGGACAATATGTGGAACTAACAGAAGGGTTGCTGTCAAGAAAATAGATAAAGTTGTTGATGAAGGGGAGAGGGAATTTCAAGCTGAAATTATTGCAATTGCTCGAACTCATCATAGAAATTTGGTTCAATTAATTGGTTTTTGTATTGATGGCTCCAGAAAGCTTCTTGTTTATGAATACATGAGCAACGGGTCTCTTTCAGATCTTCTATTCAAGGCTGAGATGCGCCTGTCATGGAAACAAAGAGTCAAAATCGCGTTGGATGTGGCTAGAGGGATCCTATATCTACATGAAGAGTGTGAAGTCCGCATTGTCCATTGCAATATTAAGCCCCAGAATATACTTTTGGATGAAGCTTGGACTGCAAAAATATCTGATTTTGGGCTTGCAAGACtgctaaaccctgaacattCAAGAACTACAACTGGAAATGAGGTAATAAGTGGCTACTTGGCACCCGAATGGCAAAAAGAAGCATCAATATCTGCAAAAGCTGACATCTACAGTTTTGGTGTGGTACTATTGGAGATCATCTGCTGCAGAAGCAATATAGATGTAAATGTTTCCTCACCAGATGAAATACTTCTTTCCAGTTGGGTATATACTTGCTTTGTAAGAGGGGAATTGAATATCCTAGTTGCAGACGAAGATGTAGAATGGAAGACATTGGAGAGAATGGTAAAGGTGGGCTTATGGTGTGTTCAAGACAACCCAACTTTGCGTCCTTCCATGAAGAATGTCATATTGATGTTGGAAGGGTTGAAAGATATTCCAATTCCTCCATCTCTAGTCCTTGTTTga 1884 0.4002 MAFIPSLFLLFVLLANEVTAQKNHSHIIKLGSRLSPKANSTSWFSASGLFAFGFYQQGNGFAIGIWLIGKPDNTIVWTANRDMPPLSSDSILELNKTGLLLHSENGNQELVTDFSDLAASASMLDSGNFVLYGNNSDVLWQSFDYPTDTILGNQSLFYELVSGMSKSDHSSGHFTLNMQNDGNLVAYPVNSSKWPQDAYWASETSGAMFSQLRLNLEGFLCLWKYGNSFCLVVANSTYLGKNTTIVYRATLDEDGIFRLYEHQIRKNNGSVNQTVVWSSLPSQCDVKGFCGLNSYCSTLNGHAVCQCYPGFLPRKQSNMFLDCKQNYSKDFCETSADKVVPYNVTYLQEEIGRGSSGAVYRGTICGTNRRVAVKKIDKVVDEGEREFQAEIIAIARTHHRNLVQLIGFCIDGSRKLLVYEYMSNGSLSDLLFKAEMRLSWKQRVKIALDVARGILYLHEECEVRIVHCNIKPQNILLDEAWTAKISDFGLARLLNPEHSRTTTGNEVISGYLAPEWQKEASISAKADIYSFGVVLLEIICCRSNIDVNVSSPDEILLSSWVYTCFVRGELNILVADEDVEWKTLERMVKVGLWCVQDNPTLRPSMKNVILMLEGLKDIPIPPSLVLV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1244 627 Gene3D Transferase(Phosphotransferase) domain 1 423 619 - -
Sto11g1244 627 Pfam Protein kinase domain 348 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1244 627 Gene3D - 153 281 IPR036426 -
Sto11g1244 627 SUPERFAMILY Protein kinase-like (PK-like) 339 613 IPR011009 -
Sto11g1244 627 CDD STKc_IRAK 351 615 - -
Sto11g1244 627 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 348 625 - -
Sto11g1244 627 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 348 - -
Sto11g1244 627 SMART blect_4 34 146 IPR001480 -
Sto11g1244 627 ProSitePatterns Protein kinases ATP-binding region signature. 351 375 IPR017441 GO:0005524
Sto11g1244 627 Pfam D-mannose binding lectin 74 166 IPR001480 -
Sto11g1244 627 Gene3D - 22 144 IPR036426 -
Sto11g1244 627 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Sto11g1244 627 Gene3D Phosphorylase Kinase; domain 1 351 422 - -
Sto11g1244 627 Pfam S-locus glycoprotein domain 236 314 IPR000858 GO:0048544
Sto11g1244 627 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 7 348 - -
Sto11g1244 627 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 348 625 - -
Sto11g1244 627 ProSiteProfiles Protein kinase domain profile. 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1244 627 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 204 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1244 Sto-Chr11 12253760 12256120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1244 314 618 Receptor kinase-like Gene Family AT1G56120 38.871 5.07e-61 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto11g1244 Pkinase 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1244 - - aip:107630435 433.335