Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1241 ATGTCCCTTCTCAGCAGATTCTTTTATAGGAGACCCCCTGATGGTTTGCTCGAATTTGTCGATAGAGTATACGTTTTCGATTCCTGCTTTTCCACCGAGGCATTGCCTGATGCAATGTACCAAATATATTTACACGAAATCATTACTGAGTTACATGAAGAATTCCCGGACTCTTCCTTTTTCGCTTTCAATTTTCGTGAAGGTGAGAAACGTAGCCAATTTGCTGAAATTCTTTGTGAATATGATGTTACTGTGATGGATTATCCTCGGCAGTACGAGGGTTGCCCTATTCTTCCATTGTCGTTGGTTCAACATTTTCTTTGCGTTTGCGAGAGCTGGCTTTCCCTTGGGAACCAACAGAATGTTATCCTTCTCCACTGTGAGAGAGGAGGTTGGCCTCTTTTGGGTTTTCTTTTGGCTAGCTTTCTAATTTATAGAAGATTACACAGTGGTGAACGCAAGACCCTTGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTACTGTCGCCTTTAAACCCATTGCCATCTCAGCTTCGTTATGTTCAGTACGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCCCCTCCTGAGCGAGCTCTTTCTCTAGATTGTGTCATTCTTAGAGCCATTCCTAGTTTTGATTCCCAGAATGGATGCAGACCCATTATCCGCATTTTTGGTAGGAATCTTCTCAGCAAGGGTGGGCTTTCTACCCAGATGCTCTACTCCAtgcacaagaaaaagaaaaccttAAGGCACTATCGGCAGGCAGACTGTGATGTGATCAAGATTGACATTCAATGTTTAGTACAAGGAGATGTGGTGTTGGAGTGTGTCCATTTGGACTTGGATCCAGAAAGGGAAGTAATGATGTTTCGTATAATGTTCAACACAGCATTTATTCGATCCAACATATTGATGCTGAACACTGAAAACCTTGACATTCTCTGGGATTCAAAGGAGAGGTATCCAAAAGGCTTCCGGGCAGAGGTTTTGTTTGGTGAGGTTGAGAGTATATCTCCTCCAAAAGCTCCAACAACCATGTTAAATGGTGAGGAGAAAGGGGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTGGAGTGGCTTGACAGTGGCGAAGATGCTGCTGTCTGGTTGCTTAAACAGCTTTCTGTGTTAAACGATGTCAAAGAGCTTTCAAGGTTGCAAGGTAAAGCAAGTTGGTACTCATCACCTGCTGACTCTgaagaagaaaataatgaaTCAAGCACTGCCGATAGTTCAGATGAAGCCTTTGATGTTATTTCAAAGTCTTCTATTGATAACTCCAAATTATTGGCCCCGGATGATTCGGTACATTTAGCTGTTGAAAGTGATGGTAGAAACAGTATACATCTTCCTTCAAGACCCCCTGATCAATCATTGATTGAAAGTGTTCCACCATCTCATCATGCTCTTAGTAAAGAATACTCTCCCTGTTCATCTCCACCATCACCTCCATCTGTTCTTGCTACTCAATCTCTATCTACAACACCAATACCATCTCAACTACTGTCTTACACAGGGCCTTCTCCAACTTCACTACCAGCACCACCTCCACCACCGCCTCCTCCACCTCCATTTGTCTCTCACAAAGCTCCACCTCCACCTccgccgccaccaccaccacctcccCCTTATTCATCTATTTCTAGTCATCAAACCTTGCagccaccaccaccgccgccacCACCCATTATGGGAAGTACGACTAACAATGTGCCACAAATATCACCATCTCTGccacctccaccaccaccaccaccaccgttgCCTATCCAAGGGGTGAAACCTCCTCCACCTCCGCCTCCACCTCCCTTAGGCCATAATGCTAGCAATGCTTCTAATGTATTACCTCCACCTCCCTTGGGACATAATGCTAGCAATGCATCTAAAGTACCACCGCCTCCACCTCCACCACCTCCTCCTCTAGTTAATAATGCTCCTAAACCACCTCCACCCCCCCCCCCACCTCCACCTGGACCCATGCAATCAGGAACAGTTCCCCCACCTCCCCTATTGGCACCAAAGCCTCCAAATGCAACTCCTCCCCCACTTAGTCGGGGTTTAGCCCCACCTCCACCTCCACCTCCACCTATGCGATCAGGTATAGTCCCCCCACCTCCTCCATTGGCACCAAAGCCTCCAAATGCACCTCCTCCTCCACCTAGTCGAGGTGTAGCCCCACCTCCACCTCCACCTCCACCTAGACCTACGCGATCAGGTTCAGTTCCCCCTCCTCCTCCACCAGTGCCAAAGCCTCCAAATGCACCTCCTCCACCACCTACTCGTGGTGCAACACCACCTCCACCTCCACCTCCTGTAGCCAAGGGATCTAGTGTGCCGCCACCACCACCCCCATCTACTACAAAAGGTAAAGCTTCTTTAGCATCAACAAATGTTGGAAGAGGTCGAGGATCTGGTGGGACTGCTATTCCCCCTAAGAAAGCTTCGTTAAAGCCCCTTCATTGGGTGAAAGTTACTCGAGCAATGCAAGGGAGTCTATGGGCTGATTCACAGAAACAAGATAACCAATCCAGGCCCCCTGAAATAGATATATCAGAACTTGAGAGTCTGTTTTCAGCAGCATCTGCTTCTGATGGGAGCAGTACTAAAGGTGTAGGTCGTCGCGGTACTAATATTCACAAACCTGAAAAAGTACAATTGATTGACCTGCGAAGAGCTTACAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTGAATGCAGTTCTGGCATTGGATTCTTCAACCTTAGATATTGATCAGGTTGAGAATCTCATTAAGTTCTGTCCCACAAAGGAAGAAATGGAAATGTTGAAGATTGAACTGTATCAAATTGTTTGTTTTCAGAATTACAGTGGGAACAAGGAAATGCTTGGGAAGTGTGAACAGTTTTTCATGGAGCTGATGAAGGTTCCACGAGTAGAATCTAAGTTGCGAGTATTTGCTTTTAAAATCACTTTTTCTAGTCAGGTGAATGATTTGAGAGTAAATTTAAATACAATCAATGATGCTGCTAAAGAGGTGAAAGATTCTATGAAATTGCGTCAAATTATGCAGACAATTCTTACATTGGGCAATGCTTTAAATCAGGGAACAGCTCGAGGATCTGCAGTAGGATTTAAATTGGATAGTCTTCTTAAACTATCTGATACTCGTGCAAGAAATAACAAAATGACTCTTATGCATTATTTGTGTAAGCTTCTTTCCGAGAAAATGCCAGAATTGCTAGATTTTAGCAAGGATCTTGTTCATTTAGAAGCAGCTTCAAAGATCCAACTAAAAGCATTGGCTGAGGAGATGCAAGCTGTGAGTAAAGGTTTGGAAAAAGTTGAGCAAGAACTCACTGCTTCAGAAAATGATGGTGTTATATCTGCAGGATTCCGGAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGAAGTGAGGTCGCTTATATCGTTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTCGCTGCCCCTTTGAGCAAGTGACACAAATCCTGGTAGTGTTTGTTAAGATGTTTAACAAGTCAAGGGAGGAGAATGAAAAGCAGGCAGATGCTGAAAAGAAGAAATTGGAGAAAGAAGCCATGAAGGAACAACGGACACCCATTAATACACATTTGAAAAAATTGGAGAAAGATGGTATTCAGTAG 3756 0.4286 MSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDAMYQIYLHEIITELHEEFPDSSFFAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPLSLVQHFLCVCESWLSLGNQQNVILLHCERGGWPLLGFLLASFLIYRRLHSGERKTLEMVHREAPKGFLQLLSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPSFDSQNGCRPIIRIFGRNLLSKGGLSTQMLYSMHKKKKTLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRIMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVESISPPKAPTTMLNGEEKGGLPIEAFSRVQELFSGVEWLDSGEDAAVWLLKQLSVLNDVKELSRLQGKASWYSSPADSEEENNESSTADSSDEAFDVISKSSIDNSKLLAPDDSVHLAVESDGRNSIHLPSRPPDQSLIESVPPSHHALSKEYSPCSSPPSPPSVLATQSLSTTPIPSQLLSYTGPSPTSLPAPPPPPPPPPPFVSHKAPPPPPPPPPPPPPYSSISSHQTLQPPPPPPPPIMGSTTNNVPQISPSLPPPPPPPPPLPIQGVKPPPPPPPPPLGHNASNASNVLPPPPLGHNASNASKVPPPPPPPPPPLVNNAPKPPPPPPPPPPGPMQSGTVPPPPLLAPKPPNATPPPLSRGLAPPPPPPPPMRSGIVPPPPPLAPKPPNAPPPPPSRGVAPPPPPPPPRPTRSGSVPPPPPPVPKPPNAPPPPPTRGATPPPPPPPVAKGSSVPPPPPPSTTKGKASLASTNVGRGRGSGGTAIPPKKASLKPLHWVKVTRAMQGSLWADSQKQDNQSRPPEIDISELESLFSAASASDGSSTKGVGRRGTNIHKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSTLDIDQVENLIKFCPTKEEMEMLKIELYQIVCFQNYSGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLRVNLNTINDAAKEVKDSMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELLDFSKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGVISAGFRKVLKNFLDIAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENEKQADAEKKKLEKEAMKEQRTPINTHLKKLEKDGIQ 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1241 1251 SMART PTEN_C2_2 198 338 IPR014020 -
Sto11g1241 1251 Pfam Formin Homology 2 Domain 828 1209 IPR015425 -
Sto11g1241 1251 SUPERFAMILY Formin homology 2 domain (FH2 domain) 784 1228 - -
Sto11g1241 1251 SMART it6_source 593 1249 IPR015425 -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 502 526 - -
Sto11g1241 1251 ProSiteProfiles Formin homology-2 (FH2) domain profile. 824 1234 IPR015425 -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 461 832 - -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 527 584 - -
Sto11g1241 1251 PANTHER FORMIN-J 744 1237 - -
Sto11g1241 1251 PANTHER FORMIN-J 1 579 - -
Sto11g1241 1251 Coils Coil 1209 1236 - -
Sto11g1241 1251 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Sto11g1241 1251 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Sto11g1241 1251 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Sto11g1241 1251 Gene3D Formin, FH2 domain 825 1220 IPR042201 -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 592 624 - -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 409 431 - -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 646 805 - -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 1212 1251 - -
Sto11g1241 1251 MobiDBLite consensus disorder prediction 806 820 - -
Sto11g1241 1251 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Sto11g1241 1251 Coils Coil 1115 1142 - -
Sto11g1241 1251 Gene3D - 197 342 - -
Sto11g1241 1251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1241 Sto-Chr11 12206400 12218227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1241 1 439 FH2 protein (formin) Gene Family AT1G31810 77.677 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1241 - - qsu:111989230 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1241 11 12206400 12218227 Sto11g1241 11 12206400 12218227 ECH