Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1240 TTGGCCCGCTTGGGCATTATGTCGCCATCCCTCCTCAATCCGGCTACGTCATCGGTGATCTCCGGTGAGATTTCGCCATCTGCGGCTGTGGCGCCGGTGAGGGACGATAGGGGTCCAGCTCAGCCGCAGTGGAGCCATCAGGAGACCAAGGAGTTCATAGCGATCCGCGCGGAATTGGAGCGGGACTTCTCTGCGTCCAAGCGAAATAAGACACTTTGGGAGGTCGTCAGCCTTAAGATGAGCGAGAGAGGCTTCAGGAGGAGCCCCGAACAGTGCAAATGCAAGTGGAAAAACCTTGTTAATCGCTATAAGGGTAAAGAGACATCTGATCCAGAGCATGGGAGGCAATGCCCATTTTTTGAAGAATTACATGCCATCTTTGCTGAAAGAGCACAAAACATGCAGCGGTTACTTCTTGAATCTGAGACTCGTTCTACTCAGACAAGGAAAGGGACGAAAAGACTAAGTGGAGATCGGTCCTCAGAGGAATTCtcagaagatgatgatgaggtTGAAGATGATAGTGAAGAGGAGAGACCTGCTAGAAGCAACTCTCGCAAAAGGAAAGCTGATAGAGTTCTAGTGGAGAAATCTTCAAGGGCAACCAATCCAGCAAATGAATGGCGGCAGTCAATGGAGAAGCTTGAAAGGGAGAGATTACTGATTGAACAGGCATGGAGGGAGAGGGAAGAGCAAAGGAGAATGAGAGAAGAGAGCCGAGCAGAAAGGAGGGATGCCTTGTTGACGACCCTTTTGAGCAAACTCATCCATGAATCTAATTAG 783 0.4866 LARLGIMSPSLLNPATSSVISGEISPSAAVAPVRDDRGPAQPQWSHQETKEFIAIRAELERDFSASKRNKTLWEVVSLKMSERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAERAQNMQRLLLESETRSTQTRKGTKRLSGDRSSEEFSEDDDEVEDDSEEERPARSNSRKRKADRVLVEKSSRATNPANEWRQSMEKLERERLLIEQAWREREEQRRMREESRAERRDALLTTLLSKLIHESN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1240 260 MobiDBLite consensus disorder prediction 140 210 - -
Sto11g1240 260 MobiDBLite consensus disorder prediction 177 196 - -
Sto11g1240 260 PANTHER - 26 196 - -
Sto11g1240 260 MobiDBLite consensus disorder prediction 146 161 - -
Sto11g1240 260 SMART sant 40 102 IPR001005 -
Sto11g1240 260 ProSiteProfiles Myb-like domain profile. 44 100 IPR001005 -
Sto11g1240 260 PANTHER - 205 258 - -
Sto11g1240 260 CDD GT1 42 107 - -
Sto11g1240 260 Gene3D - 44 105 - -
Sto11g1240 260 Pfam Myb/SANT-like DNA-binding domain 42 126 IPR044822 -
Sto11g1240 260 Coils Coil 205 225 - -
Sto11g1240 260 MobiDBLite consensus disorder prediction 162 176 - -
Sto11g1240 260 PANTHER - 205 258 - -
Sto11g1240 260 PANTHER - 26 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1240 Sto-Chr11 12203044 12204544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1240 23 255 Trihelix Transcription Factor Family AT2G38250 40.684 1.10e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto11g1240 Myb_DNA-bind_4 2.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1240 - - gmx:100812635 348.977