Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1238 ATGCCAAATGGTAGCCTTGATGCACATCTGTTTGGGAAAAAGTGCCCTCTACTACCATGGAATGTTAGGTACAAGATAGTGCTTGGATTGGCCTCAGGATTGCTCTATCTTCATGAAGAATGGCAGCAATGTGTGGTGCATAGGGATATCAAATCAAGCAATGTAATGTTGGATTCTAGTTTCAATGTGAAACTGGGTGACTTTGGATTAGCCAAGCTGATGGACCATGAGGTAGGACCCCAAACAACAGGGTTGGCTGGAACGGTTGGCTATATGGCTCCAGAGTATGTGAGTACAGGTAGGGCTAGTAAAGAGTCAGATGTGTATAGCTTTGGGTATGATGTAAAACAAGTGGAGTGTTTGATGATTGTGGGGTTGTGGTGTGTTCATCCTGATAAGAATTTGAGACCATCAATAAGGCAAGCACTTCAAGTACTTAACTTTGAGGCTCCCATGCCGAATCTTCCATCAAGCAGGCCTGTTCCAACATATCATCATCATGTACCTAATAAGCCCTCTGTCAGCTGTGCAGAAGCTTCCATAACTACAAGCCTTCACATGGGTCGTTGA 570 0.4421 MPNGSLDAHLFGKKCPLLPWNVRYKIVLGLASGLLYLHEEWQQCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHEVGPQTTGLAGTVGYMAPEYVSTGRASKESDVYSFGYDVKQVECLMIVGLWCVHPDKNLRPSIRQALQVLNFEAPMPNLPSSRPVPTYHHHVPNKPSVSCAEASITTSLHMGR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1238 189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Sto11g1238 189 SMART serkin_6 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1238 189 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
Sto11g1238 189 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1238 189 PANTHER PUTATIVE-RELATED 1 112 - -
Sto11g1238 189 PANTHER PUTATIVE-RELATED 113 189 - -
Sto11g1238 189 Pfam Protein kinase domain 2 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1238 189 PANTHER - 113 189 - -
Sto11g1238 189 PANTHER - 1 112 - -
Sto11g1238 189 SUPERFAMILY Protein kinase-like (PK-like) 1 148 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1238 Sto-Chr11 12196036 12196743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1238 1 189 Receptor kinase-like Gene Family AT5G10530 59.751 5.41e-88 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto11g1238 Pkinase 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1238 - - zju:107425083 283.493