Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1236 aTGGCTTCATCTCATTCTTTGATCCTCTCTATGCTCTTTGCATTCTCATTCATCAACATCGTACACTCAATCTCCTTCAACTTCCCCAATTTCACACCAAACATGAATGCAATTCACTTCCAAGGCGACGCCTTTTCCTCCAACGATGTTCTTCAGCTCACCAAGAACCAACTCGATGGCCCCATCACAAGCAGTACAGGTCGAGCCTCCTATGCAGAACCACTTCGTCTTTGGGATAAATCAACAGGGAAACTCACTGACTTCACCACCCATTTTTCCTTCGTCATGAAAGCCGTTGATCCAACACACTTTGGTGATGGCATTTCCTTCTTCCTATTGCCTTTTGATTCTCAAATCCCAAATGGTTCAACTGGCGGCTTCCTGGCTCTTTTCAATTCTGAATCTGCATTCAACACTAGTAAGAATCAAATAGTTGCGGTTGAGTTCGACAGCTTTAACAACACCTGGGATCCCACCTCGGACCATGTCGGAATCAATGTCAATTCCATTGAATCTGTTGCGTTTGTGAGATGGAAAAGCAGCATCAAGGATGGGAGAGTAGCTAATGCGTGGGTGGATTATAACTCTAGTACAAAAAATCTGAGTGTGTTTCTCACTTATGCTGATAACCCAGTTTATGTGAGGAATTCAAGTGTTTCTTATGTCATTGATTTGAGGGAGGTTTTGCCTGAATGGGTTAGAGTTGGATTTTCTGCTGCTACGGGAGATTGGATTGAAATACATAACATTATCTCTTGGTCATTCAATTCAAGCTTGGAAAGTGATCAGACCAGAAAAAGCAAGTTTGGTTTGGGGGTTGGATTAAGTATTGGTTTTGGGTCTTTCTCATGTGTAGTGGGTGTGATATGGTTCACCATTTGGAGAAGAAAACGTGgtaggaagaaggaagaaggtagtagtagtattaATGGCTTTGGTACCTCCATGGATGATGAATTTGAGAAAGGAACAGGACCAAGGAGATTCACGTACAAGGAACTAAGCCGTGCAACGAATGATTTTGCTGAAGCAGGAAAGCTAGGAGAAGGAGGGTTTGGAGACCATGAACTAGGGTCCCAAACCACAATTCTAGCGGGGACAATGGGGTACCTAGCCCCAGAGTGTGTGACCACAGGAAAAGCAAGTAAAGAGTCTGATGTGTATAGTTTTGGGGTAGTAGCCCTAGAGATCACATGTGGGAGAAGACCAGTTGAATTACCAAGAGGTGAAGCAGGGAGGGTGAGGCTTGTGGAGTGGGTGTGGGAGCTGTATGGAAAAGGGAAGGTTGTAGAAGCAGCTGATGAGAGACTAAGGaaggaatatgatgagaagGAAATGGAATGGTTGATGATTGTAGGGTTGTGGTGTTGCCATCCTGATCAGAGTATGAGGCCTAGTATAAGGCAAGTGATAAATGTGTTGAATTTTGAAGCTGCTTTGCCTAGTCTTCCTCCCATCATGCCTGTGCCTATGTACTATGCACCTCCCATGGAGATGTGTAGATTTTCTTACACTTCTGGGGACACAGGATCAACTAAAGGGTCTTCCTCATCATACTCATCAATGTCAGCTGGGTCTAGAAAATCTCTCTTGTAG 1596 0.4286 MASSHSLILSMLFAFSFINIVHSISFNFPNFTPNMNAIHFQGDAFSSNDVLQLTKNQLDGPITSSTGRASYAEPLRLWDKSTGKLTDFTTHFSFVMKAVDPTHFGDGISFFLLPFDSQIPNGSTGGFLALFNSESAFNTSKNQIVAVEFDSFNNTWDPTSDHVGINVNSIESVAFVRWKSSIKDGRVANAWVDYNSSTKNLSVFLTYADNPVYVRNSSVSYVIDLREVLPEWVRVGFSAATGDWIEIHNIISWSFNSSLESDQTRKSKFGLGVGLSIGFGSFSCVVGVIWFTIWRRKRGRKKEEGSSSINGFGTSMDDEFEKGTGPRRFTYKELSRATNDFAEAGKLGEGGFGDHELGSQTTILAGTMGYLAPECVTTGKASKESDVYSFGVVALEITCGRRPVELPRGEAGRVRLVEWVWELYGKGKVVEAADERLRKEYDEKEMEWLMIVGLWCCHPDQSMRPSIRQVINVLNFEAALPSLPPIMPVPMYYAPPMEMCRFSYTSGDTGSTKGSSSSYSSMSAGSRKSLL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1236 531 PANTHER RECEPTOR LECTIN KINASE 352 508 - -
Sto11g1236 531 PANTHER RECEPTOR LECTIN KINASE 15 353 - -
Sto11g1236 531 MobiDBLite consensus disorder prediction 510 531 - -
Sto11g1236 531 Gene3D - 21 271 - -
Sto11g1236 531 Pfam Protein kinase domain 359 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1236 531 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Sto11g1236 531 Gene3D Transferase(Phosphotransferase) domain 1 333 494 - -
Sto11g1236 531 PANTHER - 352 508 - -
Sto11g1236 531 PANTHER - 15 353 - -
Sto11g1236 531 CDD lectin_legume_LecRK_Arcelin_ConA 24 259 IPR001220 GO:0030246
Sto11g1236 531 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Sto11g1236 531 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 264 IPR013320 -
Sto11g1236 531 Pfam Legume lectin domain 24 266 IPR001220 GO:0030246
Sto11g1236 531 SUPERFAMILY Protein kinase-like (PK-like) 359 500 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1236 Sto-Chr11 12189040 12191046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1236 316 493 Receptor kinase-like Gene Family AT5G10530 52.778 1.10e-51 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto11g1236 Lectin_legB 2.6e-72 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1236 - - gmx:100777201 469.544