Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1222 ATGGAATCATCGACAACAAGTagtaaccaagaaagagaataCGGATGCGACGATGAGGCGTCACCAAGAGGCGTATTAGAAGTGAGGGTTTCGGGAACAGAATCAGATCGGAGTTGTGGGAGCAGCAGTTGCAGCTCGAATTATTCGTCGGCAGAGAGACCGCCGCTGGGGAACATGCCACAGTGGAAGGGGGTGATGGACGCCTTCAGGATAAACTCTGTTCGGAGATTGTCCGCCATTCCATTGTTTGCGTCCAGCTATATGATCTCCAAGAAGAGCTTGCGGAAATTAGCTCGCATTCGAAGCGCAGAGGAAGCCATTGATCTTTCCTCTTTTCCTACAAAACCATCCTGGAAGAATTTCCCTTACTCAGACCTCGCTGCTGCCACTGACGATTTCAGTCCCGAGAACTTGATAGGAAAAGGTGGGCATGCTGAGGTGTACAAAGGACGTTTGCCAGATGGAAGAATTGTAGCAGTAAAGAAGTTAGTGAACGAAGAAAAGGATAACGCAGACAACACTGGTGATTTCTTGACAGAGCTTGGGATTATAGCTCACATTAACCATCCTAATGCATGCCATTTGATTGGCTTCGGAATCGACAAGGGCCTCTTCTTCGTCCTTCACTATGCCCCTTATGGCAGTCTAGCCACTCTGCTTTTTGATTCGGAGAAGTTGGAGTGGAAAATAAGGTTCAAGGTAGCCGTTGGGGTAGCAGAGGGATTGATGTATCTGCATCATGAGTGCCCAAGACGAATCATTCACAGAGACATCAAGGCATCTAACATATTACTCAATGACAACTACGAAGCCGAGGTTTCAGATTTCGGATTGGCAAAGTGGCTCCCAGAGAAGTGGGACCACCATGTGGTGTTCCCAATAGAGGGCACATTCGGGTATCTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAGAAGACGGATGTATTCGCATTTGGGGTTTTGTTACTTGAGATCATTACAGGTCGTCGTGCAGTTGATTCTGATAGTAGGCAGAGTCTTGTGATATGGGCAAAGCCACTACTGGACACCAACAATGTAAAGGAATTAGTAGACCCCAGGTTAGAAGATGATTATGATTCCACAGAAATGAAGCGTGCCATGGCCACCGCTTCCGTTTGTGTTCACCACACGCCCTCCAAGCGCCCTTACATGAATCGGCTTTTTGGGGAAGTACAGGTAGCGCAGATGCTGAAGGGGGAAGAGGGATCTATTGAAATGAGGCAAAAATCAATAACGCCAAGATCACTGATGTTGGAAGCGTGTGATCTAGAAGACTACAGTTGCTCCAGTTACTTGAACGATCTCAATCGTCATAGGGAATTAATCATGGAGTGA 1362 0.4648 MESSTTSSNQEREYGCDDEASPRGVLEVRVSGTESDRSCGSSSCSSNYSSAERPPLGNMPQWKGVMDAFRINSVRRLSAIPLFASSYMISKKSLRKLARIRSAEEAIDLSSFPTKPSWKNFPYSDLAAATDDFSPENLIGKGGHAEVYKGRLPDGRIVAVKKLVNEEKDNADNTGDFLTELGIIAHINHPNACHLIGFGIDKGLFFVLHYAPYGSLATLLFDSEKLEWKIRFKVAVGVAEGLMYLHHECPRRIIHRDIKASNILLNDNYEAEVSDFGLAKWLPEKWDHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIITGRRAVDSDSRQSLVIWAKPLLDTNNVKELVDPRLEDDYDSTEMKRAMATASVCVHHTPSKRPYMNRLFGEVQVAQMLKGEEGSIEMRQKSITPRSLMLEACDLEDYSCSSYLNDLNRHRELIME 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1222 453 MobiDBLite consensus disorder prediction 1 57 - -
Sto11g1222 453 Pfam Protein kinase domain 136 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1222 453 SMART serkin_6 133 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1222 453 MobiDBLite consensus disorder prediction 34 54 - -
Sto11g1222 453 SUPERFAMILY Protein kinase-like (PK-like) 112 397 IPR011009 -
Sto11g1222 453 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Sto11g1222 453 PANTHER OS08G0249100 PROTEIN 7 453 - -
Sto11g1222 453 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 7 453 - -
Sto11g1222 453 Gene3D Transferase(Phosphotransferase) domain 1 212 420 - -
Sto11g1222 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Sto11g1222 453 ProSiteProfiles Protein kinase domain profile. 133 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1222 453 Gene3D Phosphorylase Kinase; domain 1 92 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1222 Sto-Chr11 12105282 12108301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1222 120 450 Trihelix Transcription Factor Family AT1G70460 40.525 9.81e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto11g1222 Pkinase 7.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1222 - - gmx:100818314 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g4244 6 45481567 45484559 Sto11g1222 11 12105282 12108301 CCT