Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1201 ATGGAATTATTTCTGGTGACAAGGTCATGTGTTTTCTTCCTTATTCTTATATCTGtgatctctctctttctccaaCCTGTTAGATCAAGAGATGATGCGGAAGCGCTATTAGCACTCAAATCCTCCATCGATGCTCACAACACGCTTCCATGGCAAGCAGGAAGCAATGTCTGCAACTGGAAGGGTGTCAGAGATTGCTTCAATGGAAGAGTCCGAAAGCTAGTGCTAGAGGATTTGAACTTAACAGGTACTTTGGACCCCAACATCTTGAACCAATTGGATCAACTCCGTGTGCTCAGTTTCAAAAGCAACTCACTCTCCGGTCTAATCCCTGACCTCTCCGGCTTGCTCAATCTCAAATCCATATTCCTCAATGACAACAACTTCTCCGGCGACTTCCCCGCCTCCATCTCCGGCCTCCACCGCGTCAAAGTCGTCGTATTTTCCGGGAACCGACTCTCGGGCAACATCCCGGCTTCGCTGGTCAAACTACGCCGTCTCTACATCCTTTGCTTGCAAGATAACTCATTCACGGGAAGCATCCCTGGTTTAAACCAAAGCAGTCTCCGATACCTGAATGTGTCGAACAACCGGCTTTCCGGCGAGATCCCGGTGACCTCAGCGTTGATCCGATTCAATACGTCGTCGTTTTCAGGGAACCCAGGGCTGTGTGGCGAACAAATCCACAAGGCATGCGAAAGCGGGAAAGCGTTCCCACCGTCGATGAGCATAAGCCCGAGCTACCCGTTGATACCAGGGAGGACGCGGGCATCATCATGGAAGCGCAGGAGAATGATGAAAATAATAGGAGGGAGTATGGGAGGATTGGTAGTGCTGCTGATATGCTTGGTTCTGATATGGATGATGTGTAGGAAATGGAGAAGAAAAGGGAAAGGGGTTGGTagtgaaggaggaggaggaggaggaggaggagaagagagaagagcAGATGCGGGCACAGGAGGTAATAATGGGGGGAAAGAGGGGGGGTTTTCATGGGAAGCGGAGGGACTAGGAAAGTTGGTGTTCTGCGGAGGGGGTAGGGAGATGAGCATGAGCTACAGCTTAGAGGATTTGCTGAAGGCGTCGGCGGAGACATTGGGGAGGGGTAGTATGGGAAGTACATACAAGGCAGTGATGGAATCTGGGTTTATAGTGACAGTGAAGAGGCTGAAGGATGCGAGGTACCCTGGGCTGGAAGAATTCAGGATGCACATGGAAGTTCTTGGCAGGCTTAGGCATCCTAATCTGGTCCCACTTAGAGCTTATTTCCAGGCTAAGGAGGAACGCCTTCTTGTTTATGACTACTTTCCCAATGGCAGCCTCTTCTCCCTCATTCACGGATCAAAAACTTGTGGTGGGGGAAAGCCTCTTCACTGGACTTCGTGCCTTAAAATCGCTGAAGACCTGGCAACTGGTCTTCTCTACATCCACCAAAACCCCGGCTTAACCCATGGAAACCTGAAATCTTCTAATGTGTTACTGGGTTCAGACTTCGAGTCTTGTCTCACAGATTATGGTCTCACATTGTTCATTAATCCGGATTCACTGGAAGAACCCAGTGCTACCACCTTATTCTACAGAGCACCCGAATGCCGGAACATCAGAAGGCCTCCGACTCAACCAGCTGATGTGTACAGCTTTGGGGTGCTTCTCCTGGAGCTGCTCACAGGGAAAACACCCTTCCAAGACCTTGTTCAGGAGCATGGCTCGGATATACCCAGGTGGGTTCGGTCCGTGCGTGAGGAAGAAACagagtccgggtccggggatgagcctgcctctgcctctgcctctgGGAATGAAGCCTCAGAAGAGAAGCTTCAGGCACTTTTGAACATAGCAATGGCGTGTATTTCACTTGTACCTGAAAATAGGCCAACAATGAGAGAAGTTTTGAAGATGATAAGAGATGCAAGAGCGGAGGCTCAAGTGTCATCCAACAGTAGTGATCATTCCCCCGGTAGATGGTCAGATACTGTTCAAAGCTTACCTAGGGAAGACCATTTGAGCATATGA 2019 0.4685 MELFLVTRSCVFFLILISVISLFLQPVRSRDDAEALLALKSSIDAHNTLPWQAGSNVCNWKGVRDCFNGRVRKLVLEDLNLTGTLDPNILNQLDQLRVLSFKSNSLSGLIPDLSGLLNLKSIFLNDNNFSGDFPASISGLHRVKVVVFSGNRLSGNIPASLVKLRRLYILCLQDNSFTGSIPGLNQSSLRYLNVSNNRLSGEIPVTSALIRFNTSSFSGNPGLCGEQIHKACESGKAFPPSMSISPSYPLIPGRTRASSWKRRRMMKIIGGSMGGLVVLLICLVLIWMMCRKWRRKGKGVGSEGGGGGGGGEERRADAGTGGNNGGKEGGFSWEAEGLGKLVFCGGGREMSMSYSLEDLLKASAETLGRGSMGSTYKAVMESGFIVTVKRLKDARYPGLEEFRMHMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTCGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTLFINPDSLEEPSATTLFYRAPECRNIRRPPTQPADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPRWVRSVREEETESGSGDEPASASASGNEASEEKLQALLNIAMACISLVPENRPTMREVLKMIRDARAEAQVSSNSSDHSPGRWSDTVQSLPREDHLSI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1201 672 Gene3D Ribonuclease Inhibitor 184 235 IPR032675 -
Sto11g1201 672 MobiDBLite consensus disorder prediction 296 330 - -
Sto11g1201 672 SUPERFAMILY L domain-like 30 225 - -
Sto11g1201 672 SUPERFAMILY Protein kinase-like (PK-like) 365 638 IPR011009 -
Sto11g1201 672 MobiDBLite consensus disorder prediction 643 672 - -
Sto11g1201 672 Gene3D Phosphorylase Kinase; domain 1 347 436 - -
Sto11g1201 672 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Sto11g1201 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 662 - -
Sto11g1201 672 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 9 662 - -
Sto11g1201 672 Pfam Protein kinase domain 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1201 672 Gene3D Transferase(Phosphotransferase) domain 1 437 660 - -
Sto11g1201 672 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Sto11g1201 672 MobiDBLite consensus disorder prediction 576 603 - -
Sto11g1201 672 ProSiteProfiles Protein kinase domain profile. 361 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1201 Sto-Chr11 11939855 11943069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1201 9 672 Receptor kinase-like Gene Family AT1G60630 61.607 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto11g1201 Pkinase 4.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1201 - - gmx:100809866 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1201 11 11939855 11943069 Sto11g1201 11 11939855 11943069 ECH