Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1190 ATGCAGCCGCAGAATCCCTCTGCACTGGTGCCTCAGCTCAACAATCCTCAGtcctccgccgccgccgccaccaccTCCCTTAGGTCACCGCCTTCTGTAACCCCACAATCACAGTCTCAGCTATCTTCCCCACTCCCTCTTGCTCCACTCTCCACTCCCCTCCGCCAGACTCTATTGCCATCACTGCCACCCGATCATGCAGTTGGACCGGTCGTGCCCATCACAGCGACTAATCCATCTGGTGAGCCCGCTTTAACGGCGCCGCCTCCTTGCCCGTTGCCCAGAATCCGGCTCTCGGATATTGCTCAGTACGATGGAGCTCCAGCAGGGTCCTATGTGAGAGCAGTCGAAGCATTGTCTGGGTCTTTGATGAGGCATAATGCGGCGTTGATCGAATTGGGGAGCGAGGATGCTGCTCTGATGAGGTGCGGATTGGAAGGTTCGAGGTTGTTTTTCAGGAGCAGGGCCcatctgggtgttgggaagggAAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGATTGGGATTCATCTCCCCCGTGCATGGCTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTTCTGCTTTGTGTGCCATTGCAAGGCATCTCCGTCTCCGAAGCGATGTTTTTAACCATTTGCTTGATGATACTCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCAACCTACTCACATGCTTCTTTGCTAAATGGAAAAGGTGCTATTGGAGGTGGTAAGCCAACCATGAATGGTGAAGTTGAGAAGGGATTGTTAGCATTGATAACTTCAGACACTCCTGGTCTTCAGGTATGTGACCCCAATGGCCGCTGGTATCTGGCAGATAGTGGGTCTGGTCCTGGGGATCTTTTGTTGCTAATAGGAAAGGCACTGAGCCATGCTACTGCTGGCCTTCGTCCTGCTGCATCATATAGAGCTTCCCCTGATTATTTTCTAGGCTCTAACAGTGGAGGAAGGACATCTCTTGCATTTAGACTCATGCCACAGGGAAATGCTATATTGGATTGTTCTCCAATAGCAGCTGCTGGCCATGTTATTCCCCAAAGCTACGTTCCAATATCTGTAAGCCAGTTTATGGATGACCTTTCTGCAGAAGATGAAGTGATAGGTACCCGGTCTTGTAATACTTATGTTGTTGGAAACAATGTGAATAAGGAGCAATCATTGAGAAGTGTTCTATCAGATCCTTTATCTGGTGCATTCCTTGAAGATGCTATGCTTGTCTCATGTGGGCATTCATTTGGAGGTCTCATGCTGAGGAGAGTCATTGAAACTTCAAGATGTACTCTCTGCAATGCAGATATTGAGACCAGTTCTTTGATCCCTAATTTTGCTCTAAGAGCCGCTGCCACAGCAGTCAAGCATGAGGATGATCGAAGGTTATTCCATAATGCTGTTCTCCGGAAGCGGCGGAAAGAAATGGGTGATCAAATAGATTCCTTGAGAAGAACAAACAGGGAAAACGGAGATGCTACTGCTGATGATGGACTCCACAGGGGAGTGCAGTATCCATTTTCAGTAAATGAAAAGGTGATAATTAAGGGTAATAGGAGAACACCAGAAAAATTTGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTCAAGATTATTGGAACTGGGGAGAATGTGCGCCTGCAGTACCGTTCTCTTAGGAAGCTGTTGAACTTACCAGCCATAGAAGATCAGTGTCCGTCACAGTCACAGTCACAGTCACAGCCAATTCAGAATAGTAGCTCTTAA 1803 0.4676 MQPQNPSALVPQLNNPQSSAAAATTSLRSPPSVTPQSQSQLSSPLPLAPLSTPLRQTLLPSLPPDHAVGPVVPITATNPSGEPALTAPPPCPLPRIRLSDIAQYDGAPAGSYVRAVEALSGSLMRHNAALIELGSEDAALMRCGLEGSRLFFRSRAHLGVGKGSRGVHMYRAGRALEDWDSSPPCMADIFRCMGKAARSALCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSHASLLNGKGAIGGGKPTMNGEVEKGLLALITSDTPGLQVCDPNGRWYLADSGSGPGDLLLLIGKALSHATAGLRPAASYRASPDYFLGSNSGGRTSLAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEDEVIGTRSCNTYVVGNNVNKEQSLRSVLSDPLSGAFLEDAMLVSCGHSFGGLMLRRVIETSRCTLCNADIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQIDSLRRTNRENGDATADDGLHRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNLPAIEDQCPSQSQSQSQPIQNSSS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1190 600 Gene3D - 164 381 IPR027443 -
Sto11g1190 600 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 400 471 IPR013083 -
Sto11g1190 600 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 81 592 - -
Sto11g1190 600 SUPERFAMILY Clavaminate synthase-like 179 352 - -
Sto11g1190 600 Coils Coil 478 498 - -
Sto11g1190 600 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 81 592 - -
Sto11g1190 600 MobiDBLite consensus disorder prediction 1 49 - -
Sto11g1190 600 SUPERFAMILY RING/U-box 403 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1190 Sto-Chr11 11846765 11864140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1190 403 573 Plant U-box Gene Family AT5G05230 41.618 3.24e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1190 - - adu:107477161 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1190 11 11846765 11864140 Sto11g1190 11 11846765 11864140 ECH