Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1189 ATGAGTACTCGGGCACTTAGGGCTGCTGCTGTTAGAAGTTACAAGCGGAGGAAGACAGCTTTGGACTTGGACCTTAACTGCGCCCCGCCTGGAGAGAACCGGGAGCAGGAAGATGGACCTTCACAGCAGATAGAGCCTCAAGAAGTTCAAGCTGGCCATCAACAGCCGGTTCTACAACCTGCAATGATTGATGTTGAGGCCATTGATGATGATGTTGTTGAATCATCCCCCAGGGCTTTTGCTGAGGCtaaaaacaattcaagaagAAATCGTTTACGGACTATAGTTGTTGTGGATTTAGATAATGTGTGCCTCTATGATGAGCCTGTTTATCATGTTTATTCAGTTCTTTTCCAACACCCACAAGGTAAAAAAAGGTTAGCTAGAGAAAATGTTACGAGGCCACCTGAACCTCCGAAGGAGCCTGTGTTTAACTGCCCAATATGCATGTGCCCTTTGGAAGAAGAAATGTCAACAAGGGTTTCTGTAGTAAGTGCGTCGAGGAGAATTGGGAATTGA 519 0.4489 MSTRALRAAAVRSYKRRKTALDLDLNCAPPGENREQEDGPSQQIEPQEVQAGHQQPVLQPAMIDVEAIDDDVVESSPRAFAEAKNNSRRNRLRTIVVVDLDNVCLYDEPVYHVYSVLFQHPQGKKRLARENVTRPPEPPKEPVFNCPICMCPLEEEMSTRVSVVSASRRIGN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1189 172 MobiDBLite consensus disorder prediction 22 53 - -
Sto11g1189 172 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF4-LIKE 1 101 - -
Sto11g1189 172 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF4-LIKE 135 162 - -
Sto11g1189 172 PANTHER ELFLESS, ISOFORM B 135 162 - -
Sto11g1189 172 PANTHER ELFLESS, ISOFORM B 1 101 - -
Sto11g1189 172 MobiDBLite consensus disorder prediction 36 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1189 Sto-Chr11 11840408 11843661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1189 12 160 C3H Transcription Factor Family AT5G48655 35.976 1.40e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1189 K22651 - gmx:100306616 155.992