Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1187 ttGGCTTGCATTTCAAAATCGGAGCAGATGCTAGGAGATGAGATCGGGAAAGGAGCATATGGTCGAGTTTACAAAGGTTTGGACCTAGAGAATGGAGACTTTGTGGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAAGAGGATCTCAACATCATCATGCAAGAGATCGATTTATTAAAGAATTTGAACCACAAAAACATTGTAAAATATCTTGGATCCTTAAAGACAAAGACTCACCTTCATATTATCCTTGAGTAA 261 0.3678 LACISKSEQMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILE 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1187 86 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sto11g1187 86 ProSiteProfiles Protein kinase domain profile. 9 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1187 86 PANTHER MAP3K EPSILON PROTEIN KINASE 1 10 86 - -
Sto11g1187 86 Gene3D Phosphorylase Kinase; domain 1 4 86 - -
Sto11g1187 86 Pfam Protein kinase domain 13 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1187 86 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 10 86 - -
Sto11g1187 86 SUPERFAMILY Protein kinase-like (PK-like) 11 86 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1187 Sto-Chr11 11827092 11833395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1187 10 86 MAP Kinase Kinase Kinase AT3G13530 96.104 1.09e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Sto11g1187 Pkinase 4.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1187 - - pvy:116137810 154.836