Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1166 ATGCTTGGACTCCGACCTCACACTCCCAACACTAGACTCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTTCCTCGCTACCCCGACGGCAAGCTCCGTTACCAGGGCGGCCACACCCGTGTCCTCGCCGTCCCTCGCTCCATTCCTTTTGCGGAGCTATTGTTGAAGATGGGAGAGCTGTGTGACTCAGCTGTTAGTCTCCGTTGCCAATTGCCCACCGAAGATCTCGATGCTTTAGTTTCTATCACCTCTGACGAGGATCTAGCAAATCTCATCGAGGAATATGATCGTCTTCACTCCCCTCCCTCCTCTTTAAAGATCAGAGCCTTCCTTTCGCCTCCCAACTGCTATCCGCCTCTGCTCCATCCCACGGCGTATCCAATTGGCTTCCAAAAATCTGGTGGCAGGAATATTCCTCTTCCTCACTATGCTTATCATCCTCAGGGAAACCCAGGCCATATTTACCTTATCCACAACGGGAACCATTGGCAAAAACGCTGCAGTGATTTTATCCATGGATGA 522 0.5153 MLGLRPHTPNTRLKFLCSYGGKILPRYPDGKLRYQGGHTRVLAVPRSIPFAELLLKMGELCDSAVSLRCQLPTEDLDALVSITSDEDLANLIEEYDRLHSPPSSLKIRAFLSPPNCYPPLLHPTAYPIGFQKSGGRNIPLPHYAYHPQGNPGHIYLIHNGNHWQKRCSDFIHG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1166 173 SUPERFAMILY CAD & PB1 domains 29 115 - -
Sto11g1166 173 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 122 - -
Sto11g1166 173 PANTHER OS05G0427100 PROTEIN-RELATED 9 122 - -
Sto11g1166 173 Pfam PB1 domain 29 112 IPR000270 GO:0005515
Sto11g1166 173 SMART PB1_new 27 112 IPR000270 GO:0005515
Sto11g1166 173 CDD PB1_UP2 16 111 - -
Sto11g1166 173 Gene3D - 31 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1166 Sto-Chr11 11576031 11576749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1166 12 111 MAP Kinase Kinase Kinase AT5G57610 55.000 1.55e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1166 - - tcc:18609561 220.32