Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1163 ATGGCTCTAATACTTGGTGCTACTCAACCTCACTTACTATCTCCCATTCGTCATCATCATACAAAACCTTGTGTCAGAGTTTCTCATAGAAGCTTCCATTTCGCCGCTAATACTCGAATTCGGATTGCTCTGTACGCTACTCCTTTTAATCCCAGACACACCCCTCCAAAATCTGCATCCATAGATGGGGTTTCTGTTCAGAACAATCCACGAGTTTTCCATAACAGGggcgaagaagaagatgatcatGATGAAGACTTTCTGAAGAGGCTTAGGAGATGCTTCACTTACCTTTCTTCGATTTTACCTGGCGGAAGCTGGTGGGACTTCTCCGAAGACGTCCAGATTCAGGATTTAGCTAAACCCGTCACTGTGTGGCGCGCGCTTCACAAAATGTGGCAACTAATTGCTCAAGACCGATGGATTATATTCGCTGCATTCTCTGCTCTGATTCTTGCAGCAGTTTCAGAGATTTCCATACCGCATTTCTTAACAGCATCCATCTTCTCTGCTCAGAGTGCGGAAATTTCAGTTTTCCGTCGGAATGTGCTTCTCTTGGTTCTGTTCTGTATAACTTCGGGAATATGCAGTGGGATACGAGGATGCTGTTTTGGAATTGCGAACATGATACTGGTTAAGAGAATGAGAGAAACATTATACTCCTCCCTTCTTCTTCAGGATATATCATTTTTTGACACTGAAACAGTTGGTGATTTGACAAGTAGACTTGGGGCTGATTGTCAACAAGTTTCACGTGTTATTGGAAATGATCTTAACTTAATATTGCGCAATGTTCTTCAGGCAACAGGTGCATTAACCTACTTGTTAATTTTGTCTTGGCGACTTGGTTTATATACATTGATGATATGCTCTATATTATCAGCAGTTTTACTACTTTATGGAAGGTACCAGAAAAAGGCTGCAAAGTTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACATTCTCTCTGATTAGAACTGTCCGTGTTTATGgaacagaagaagaagaacttgGAAGGTACAAATGGTGGCTGGGAAAATTAGCTGATATAAGCTTGCGACAAAGTGCTGCATATGGATTTTGGAATTTCAGCTTCAACATACTTTATCATTCAACTCAGGTTATTGCTGTGCTGTTTGGAGGAATGTCTATTCTAGGAGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTGGGGGACAGTATATCATCTTTAATGCAATCTGTTGGGGCTAGTGAGAAAGTATTCCATTTGATGGATCTCTCACCTAGCAGACAATTCATAGAAAGAGGAGTAAAGATGCAGAGGTTAACGGGGCACATTGAATTTATAAATGTGTCGTTTCACTATTCTTCAAGGCCCACGGTATCCGTAGTGCAGCAGGTAAGCTTTGCTGTCCGTCCTAGTGAAGTGGTTGCTATTGTTGGTCTTAGTGGCAGTGGAAAAAGCACACTGGTGAACCTCTTGCTACGTCTATATGAGCCAACAAATGGTCAGATTTTGATTGATGGCATTCCTCTTAGAGAGTTGGATATCACGTGGTGGAGAGAAAGAGTTGGATTTGTAGGACAGGAACCTAAGCTCTTCAGAATGGATATTAGCTCAAACATCAGATATGGATGCACTCGAGATATAAAGCAAGAGGATGTTGAATGGGCTGCAAAGCAGGCCTATGCGCATGACTTCATCTCAGCACTTCCTAATGGTTATGAAACACTTGTCGATGATGATTTGTTAAGTGGGGGACAAAAACAGCGAATTGCTATTGCTCGAGCCATTCTCAGGGATCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCATTAGATGCTGAGAGTGAACATAATGTCAAGGGTGTTCTTCGTTCAGTCAGAAGTGACTCCATGACAAAGAGAAGCGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCAGCTGACAGGATAGTGGTAATGGATGGTGGTCAAGTTGTTGAGATGGGAAATCACAGGGAACTTCTCTTAAAAGATGGTTTATATGCTCGATTGAACAGTAAACAGGCTGACTCGGTGGCATGA 2115 0.4113 MALILGATQPHLLSPIRHHHTKPCVRVSHRSFHFAANTRIRIALYATPFNPRHTPPKSASIDGVSVQNNPRVFHNRGEEEDDHDEDFLKRLRRCFTYLSSILPGGSWWDFSEDVQIQDLAKPVTVWRALHKMWQLIAQDRWIIFAAFSALILAAVSEISIPHFLTASIFSAQSAEISVFRRNVLLLVLFCITSGICSGIRGCCFGIANMILVKRMRETLYSSLLLQDISFFDTETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQATGALTYLLILSWRLGLYTLMICSILSAVLLLYGRYQKKAAKLIQEVTASANDVAQETFSLIRTVRVYGTEEEELGRYKWWLGKLADISLRQSAAYGFWNFSFNILYHSTQVIAVLFGGMSILGGHITAEKLTKFILYSEWLIYSTWWVGDSISSLMQSVGASEKVFHLMDLSPSRQFIERGVKMQRLTGHIEFINVSFHYSSRPTVSVVQQVSFAVRPSEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGIPLRELDITWWRERVGFVGQEPKLFRMDISSNIRYGCTRDIKQEDVEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSMTKRSVIVIAHRLSTIQAADRIVVMDGGQVVEMGNHRELLLKDGLYARLNSKQADSVA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1163 704 Gene3D ABC transporter type 1, transmembrane domain 126 444 IPR036640 GO:0005524|GO:0016021
Sto11g1163 704 CDD ABC_6TM_TAP 146 433 - -
Sto11g1163 704 Gene3D - 449 703 IPR027417 -
Sto11g1163 704 PIRSF ABC_prm/ATPase_B 65 704 - -
Sto11g1163 704 ProSitePatterns ABC transporters family signature. 597 611 IPR017871 GO:0005524
Sto11g1163 704 SUPERFAMILY ABC transporter transmembrane region 131 441 IPR036640 GO:0005524|GO:0016021
Sto11g1163 704 Pfam ABC transporter 478 625 IPR003439 GO:0005524
Sto11g1163 704 PANTHER ABC TRANSPORTER B FAMILY 84 703 - -
Sto11g1163 704 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 144 425 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto11g1163 704 Pfam ABC transporter transmembrane region 145 410 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto11g1163 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 459 698 IPR003439 GO:0005524
Sto11g1163 704 SMART AAA_5 486 675 IPR003593 -
Sto11g1163 704 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 84 703 - -
Sto11g1163 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 699 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1163 Sto-Chr11 11542208 11548197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1163 214 699 Calmodulin-binding Proteins AT2G36910 34.141 2.23e-72 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1163 - - gmx:100775951 1082.78