Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1152 ATGGCTTCCCTTAATCTCCTTCCTTCTCTAATTCTTCTCCCTCTTCTGTCAACTTCTTTTGTTGCAGTTTTTTCCTTGGATAACTCACCTCATATAGTCCCTTTTAAATGCTCTGCAAAAATCAACCAGTGCAATGCCTCACTCTACCACATAAACTACAATCAGAACATAGAAGAAATAGCCTCTCTTTACTCTGTTAATTCATCTCAAATCAAGCCGATAATGCGTGGTACCAATCAAGATTACCTCATAACAGTACCTTGTTCTTGCAGAACAACCAGTGACCTCAATGGATATTTCTTTGACACAAACTACACAGTGAAGCAAGATGACACTTTTTCAGATATTTCAAACTTTTATTACAGTGGACAAGCCTGGTCTGGTAAGGATAATTTGTCTATAGGTGAAAACTTACAAATACATCTTCTTTGTGGGTGTTCAGAAAGTGACTCTCAGATTGTCGTGACCTATACGGTTCAGCAGAATGATACAACTACAGCAATTGCTAATCTGCTAACTGCTACACTAACTGGGATTCAGAGTATGAATGAAAATTTACCAAAGGACCTTTCATTCATAGGCTTGGGTTGGGTTCTATATGTTCCTAAAGAGTTGAGAGGGATTCCATCTTCAAAAGGAAATGGAAACAAAAACAAGTTTAACAAGGATGCTATTATCATTGGCATCTTGGCGGGTGTCTCAGTACTTTGTATTATCATAAtgatcattttcattctcagaAGAAGAACTAAAGCCAATAAAACCAGCAAAATTGCTTCAAAATCTGTATCTAGAAGATCAGTTCTGCGAACATCAAAAAGATCAACTCTTTCCTTAAAGAACCATAGCCTTTATAATGAAAATATAGAAGGTAATACAAACCAATTTTGGAAACCAAAAGCAACTTGTGATGTAACATCATTTGACTCAGAAAGACCAGCAATATTTTATCTTGAGGAGATTCAAGAAGCTACAAATAACTTTGATGAAAGTCAAATAATAGGAAAAGGAGGATATGGTAGTGTGTATTTTGGAAAGTTACGGAACAAGGAGGTTGCGGTGAAAGATATGAGGTCTAATAAATCTAAAGAATTCTATGCAGAACTCAAGGTCTTATGTAGGATTCATCATATCAATATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGATCACCTCTATTTGGTGTATGAGTATGTATCAAATGGATCTCTCAGCGATCATCTTCATGATCCATTTCTAAAAGATCATCAACCTCTTTCATGGACTGCTAGAGTACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACAAAAGCACGATATGTGCACCGAGATATAAAGACTAGCAATATTCTTCTTGATGAGAAGCTCAGAGcaaagGTAGCAGATTTTGGACTCGTAAAGCTGTTAGAACGAACAAATGATGAAGATTTTATAGCAACAAGACTTGTTGGAACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCATGTGAATGCAAAAACCGATGTGTTTGCATTTGGAGTAGTTCTGTCAGAGCTAATAACAGGAAAACGCGCCCTATTTCGCGAAAGTCCAGGCGCCCCCAAAATGAGATCACTTATTTCAGTAATTAATAAAGTATTCCAAGATGATGATCCAGAAAGTGCTTTAGAGGCTATCATAGATAAACATCTTCGAGATAGCTATCCTATGGAAGATGTCTTCAAGATGGCAGAAATTGCTGAAAGGTGCTTACGTGAAGAACCAATTGAAAGGCCAGAAATGAGGGAGATTGTGGGGATATTATCACACATTGTGATGTCCTCCATAGAGTGGGAAGCATCATTAGGTGGGAACAGCCAAGTCTTCAGTGGCTTATTTACAGGAAGATGA 1899 0.3739 MASLNLLPSLILLPLLSTSFVAVFSLDNSPHIVPFKCSAKINQCNASLYHINYNQNIEEIASLYSVNSSQIKPIMRGTNQDYLITVPCSCRTTSDLNGYFFDTNYTVKQDDTFSDISNFYYSGQAWSGKDNLSIGENLQIHLLCGCSESDSQIVVTYTVQQNDTTTAIANLLTATLTGIQSMNENLPKDLSFIGLGWVLYVPKELRGIPSSKGNGNKNKFNKDAIIIGILAGVSVLCIIIMIIFILRRRTKANKTSKIASKSVSRRSVLRTSKRSTLSLKNHSLYNENIEGNTNQFWKPKATCDVTSFDSERPAIFYLEEIQEATNNFDESQIIGKGGYGSVYFGKLRNKEVAVKDMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDHLYLVYEYVSNGSLSDHLHDPFLKDHQPLSWTARVQIALDAAKGLEYIHDYTKARYVHRDIKTSNILLDEKLRAKVADFGLVKLLERTNDEDFIATRLVGTPGYLPPESVKELHVNAKTDVFAFGVVLSELITGKRALFRESPGAPKMRSLISVINKVFQDDDPESALEAIIDKHLRDSYPMEDVFKMAEIAERCLREEPIERPEMREIVGILSHIVMSSIEWEASLGGNSQVFSGLFTGR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1152 632 Gene3D Phosphorylase Kinase; domain 1 307 399 - -
Sto11g1152 632 ProSiteProfiles LysM domain profile. 155 201 IPR018392 -
Sto11g1152 632 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 25 632 - -
Sto11g1152 632 SUPERFAMILY Protein kinase-like (PK-like) 308 604 IPR011009 -
Sto11g1152 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Sto11g1152 632 SUPERFAMILY LysM domain 155 202 IPR036779 -
Sto11g1152 632 ProSiteProfiles Protein kinase domain profile. 328 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1152 632 Pfam LysM domain 157 202 IPR018392 -
Sto11g1152 632 Pfam LysM domain 105 120 IPR018392 -
Sto11g1152 632 Gene3D Transferase(Phosphotransferase) domain 1 400 617 - -
Sto11g1152 632 SMART serkin_6 328 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1152 632 ProSitePatterns Protein kinases ATP-binding region signature. 334 355 IPR017441 GO:0005524
Sto11g1152 632 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 25 632 IPR044812 GO:0019199|GO:0045087
Sto11g1152 632 Gene3D LysM domain 148 206 IPR036779 -
Sto11g1152 632 Pfam Protein kinase domain 329 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1152 Sto-Chr11 11491330 11494867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1152 291 632 Receptor kinase-like Gene Family AT1G51940 52.586 2.22e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto11g1152 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1152 - - gmx:100791718 776.933